RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 OR5P3Q8WZ94 311 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 TMEM106BQ9NUM4 274 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 UFSP2Q9NUQ7 469 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 CHCHD3Q9NX63 227 aaKnown RBP12.73□□□□□ -0.37
CD9-210ENST00000543916 SCN3BQ9NY72 215 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 ERVK-18Q9QC07 812 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 ENPP5Q9UJA9 477 aa12.73□□□□□ -0.37
CD9-210ENST00000543916 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 DHRS7CA6NNS2 312 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 WNT9BO14905 357 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 ZFPL1O95159 310 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 ISG15P05161 165 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 GRPP07492 148 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 INHBBP09529 407 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 USF1P22415 310 aaPredicted RBP12.72□□□□□ -0.37
CD9-210ENST00000543916 CRHBPP24387 322 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 THBS2P35442 1172 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 CEP78Q5JTW2 689 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 TMEM244Q5VVB8 128 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 TMEM42Q69YG0 159 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 ZNF676Q8N7Q3 588 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 OR51A4Q8NGJ6 313 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 RPS4Y2Q8TD47 263 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 GATAD2BQ8WXI9 593 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 MYDGFQ969H8 173 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 SMR3AQ99954 134 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 DUSP21Q9H596 190 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 NARFLQ9H6Q4 476 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 C14orf119Q9NWQ9 140 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 BABAM2Q9NXR7 383 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 TPRKBQ9Y3C4 175 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 WIPI2Q9Y4P8 454 aa12.72□□□□□ -0.37
CD9-210ENST00000543916 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
CD9-210ENST00000543916 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
CD9-210ENST00000543916 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 LRP5LA4QPB2 252 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.37
CD9-210ENST00000543916 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.37
CD9-210ENST00000543916 NRASP01111 189 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 FOSL1P15407 271 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.37
CD9-210ENST00000543916 SLC3A1Q07837 685 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 ZNF154Q13106 437 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 CDK5R1Q15078 307 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 RBM48Q5RL73 367 aaKnown RBP12.71□□□□□ -0.37
CD9-210ENST00000543916 CLVS2Q5SYC1 327 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 PLCXD3Q63HM9 321 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 ZNF826PQ6ZT77 177 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 MOB3CQ70IA8 216 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 NANOGP1Q8N7R0 232 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 CCDC54Q8NEL0 328 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 OR1M1Q8NGA1 313 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 Q8TCH9 128 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 HAVCR2Q8TDQ0 301 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 MICU1Q9BPX6 476 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 RTL8AQ9BWD3 113 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 CDCA4Q9BXL8 241 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 RASSF4Q9H2L5 321 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 Q9H521 79 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 FN3KRPQ9HA64 309 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 PLEKHA1Q9HB21 404 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 GPR173Q9NS66 373 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 ZANQ9Y493 2812 aa12.71□□□□□ -0.37
CD9-210ENST00000543916 TMEM212A6NML5 194 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 IFNL4K9M1U5 179 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 MYL12BO14950 172 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 OGG1O15527 345 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 IGHV2-70P01814 119 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 MT-ND2P03891 347 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 IL2RGP31785 369 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 GPM6AP51674 278 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 CDH15P55291 814 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 WNT4P56705 351 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 KRTAP1-1Q07627 177 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 MZT1Q08AG7 82 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 IRF3Q14653 427 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 CEACAM21Q3KPI0 293 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 RNLSQ5VYX0 342 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 RPL22L1Q6P5R6 122 aaKnown RBP12.7□□□□□ -0.38
CD9-210ENST00000543916 C11orf53Q8IXP5 236 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 ZFP41Q8N8Y5 198 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 OR5AK2Q8NH90 309 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 CLDND2Q8NHS1 167 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 RGP1Q92546 391 aaPredicted RBP12.7□□□□□ -0.38
CD9-210ENST00000543916 RAB1CQ92928 201 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 ERGIC1Q969X5 290 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
CD9-210ENST00000543916 RNF170Q96K19 258 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 C1orf123Q9NWV4 160 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 HHLA2Q9UM44 414 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 NPTNQ9Y639 398 aa12.7□□□□□ -0.38
CD9-210ENST00000543916 A6NLC8 198 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 RGS10O43665 173 aa12.69□□□□□ -0.38
CD9-210ENST00000543916 ZNF205O95201 554 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms