RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PSMB4P28070 264 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 CD96P40200 585 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 CAMPP49913 170 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ATXN7L3Q14CW9 347 aaPredicted RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 SSX1Q16384 188 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 MDGA2Q7Z553 956 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 SULT4A1Q9BR01 284 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 FAM234AQ9H0X4 552 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 OR2D2Q9H210 308 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 SERTAD4Q9NUC0 356 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ALKBH4Q9NXW9 302 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 CLEC1BQ9P126 229 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 KIAA1456Q9P272 454 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 UBIAD1Q9Y5Z9 338 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 COL11A1P12107 1806 aaPredicted RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 HSPB2A8KAH6 182 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 A8MVM7 634 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 J3QLI3 93 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 TSPAN13O95857 204 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 TRGC2P03986 189 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 ARL2P36404 184 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 HSPB2Q16082 182 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 C9orf135Q5VTT2 229 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 Q6ZSR9 355 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 DEFB128Q7Z7B8 93 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 Q8WTZ3 238 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 VAMP8Q9BV40 100 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 CTDSP1Q9GZU7 261 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 NXF5Q9H1B4 397 aaKnown RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 TUBA4BQ9H853 241 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 GPATCH2LQ9NWQ4 482 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 JPT1Q9UK76 154 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 B3GALT5Q9Y2C3 310 aa7.91□□□□□ -1.14
VPS13D-212ENST00000543766 MRPS28Q9Y2Q9 187 aaKnown RBP7.91□□□□□ -1.14
VPS13D-212ENST00000543766 C7orf66A4D0T2 115 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 LAMTOR5O43504 91 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 MPIG6BO95866 241 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SFTA3P0C7M3 94 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SLC35E2P0CK97 266 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 HOXB6P17509 224 aaKnown RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 MAGEA5P43359 124 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 BDKRB1P46663 353 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 DCDP81605 110 aaKnown RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 ID3Q02535 119 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 ACSM2AQ08AH3 577 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 PLCXD2Q0VAA5 305 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 KIAA1644Q3SXP7 199 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 AWAT1Q58HT5 328 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 CD276Q5ZPR3 534 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 ACSM2BQ68CK6 577 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 C22orf42Q6IC83 251 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 GRHL2Q6ISB3 625 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SERPINA11Q86U17 422 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 GKN2Q86XP6 184 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SHISA5Q8N114 240 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 C5orf17Q8NAS9 161 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 OR2T12Q8NG77 320 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 OR5W2Q8NH69 310 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 GGHQ92820 318 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SLC25A28Q96A46 364 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SARAFQ96BY9 339 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 WDR34Q96EX3 536 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 INSM2Q96T92 566 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SSBP4Q9BWG4 385 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SEC11CQ9BY50 192 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 GABARAPL3Q9BY60 117 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 WSB1Q9Y6I7 421 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 OOEPA6NGQ2 149 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 RS1O15537 224 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 HCRTR1O43613 425 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 PTHP01270 115 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 CD1DP15813 335 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 AVPR1BP47901 424 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 UCNP55089 124 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 FOXA1P55317 472 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 DCAF4L1Q3SXM0 396 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 TDRG1Q3Y452 100 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 C1orf194Q5T5A4 169 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF776Q68DI1 518 aaPredicted RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 OR11A1Q9GZK7 315 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 DCAF13Q9NV06 445 aaKnown RBP7.9□□□□□ -1.14
VPS13D-212ENST00000543766 FIS1Q9Y3D6 152 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 ZSWIM8A7E2V4 1837 aa7.9□□□□□ -1.14
VPS13D-212ENST00000543766 IGHV2OR16-5A0A0B4J2B6 119 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 F5H5P2 479 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 J3QR89 54 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 ESR1P03372 595 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 CTSLP07711 333 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 BCKDHAP12694 445 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 FCARP24071 287 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 GZMMP51124 257 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 CCL7P80098 99 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 PSG3Q16557 428 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF648Q5T619 568 aaPredicted RBP7.9□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF367Q7RTV3 350 aa7.9□□□□□ -1.15
VPS13D-212ENST00000543766 SAMD12Q8N8I0 201 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms