RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CHIAQ9BZP6 476 aa10.85□□□□□ -0.67
RTN3-212ENST00000543123 RASSF4Q9H2L5 321 aa10.85□□□□□ -0.67
RTN3-212ENST00000543123 TNFRSF19Q9NS68 423 aa10.85□□□□□ -0.67
RTN3-212ENST00000543123 PDP1Q9P0J1 537 aaPredicted RBP10.85□□□□□ -0.67
RTN3-212ENST00000543123 ONECUT1Q9UBC0 465 aa10.85□□□□□ -0.67
RTN3-212ENST00000543123 FAM96BQ9Y3D0 163 aa10.85□□□□□ -0.67
RTN3-212ENST00000543123 RHBDD3Q9Y3P4 386 aa10.85□□□□□ -0.67
RTN3-212ENST00000543123 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 CDIPTO14735 213 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 CST4P01036 141 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 ANXA8P13928 327 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 OMGP23515 440 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 RPS7P62081 194 aaKnown RBP10.84□□□□□ -0.67
RTN3-212ENST00000543123 GUCA2AQ02747 115 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 PRDX4Q13162 271 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
RTN3-212ENST00000543123 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 C11orf53Q8IXP5 236 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 ZDHHC23Q8IYP9 409 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 NPRL2Q8WTW4 380 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 MED30Q96HR3 178 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 AMELYQ99218 206 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 CCL13Q99616 98 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 PKP2Q99959 881 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 THTPAQ9BU02 230 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 DPAGT1Q9H3H5 408 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 HAO2Q9NYQ3 351 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 LAMP5Q9UJQ1 280 aa10.84□□□□□ -0.67
RTN3-212ENST00000543123 ACOD1A6NK06 481 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 ZNF850A8MQ14 1090 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 ACOT8O14734 319 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 SELENOFO60613 162 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 FBP1P09467 338 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
RTN3-212ENST00000543123 POU4F2Q12837 409 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 IKZF1Q13422 519 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 DNAL1Q4LDG9 190 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 ATPAF1Q5TC12 328 aaPredicted RBP10.83□□□□□ -0.68
RTN3-212ENST00000543123 LCN1P1Q5VSP4 162 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 OLFML2AQ68BL7 652 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 STUMQ69YW2 141 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 DEGS2Q6QHC5 323 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 METAP1DQ6UB28 335 aaPredicted RBP10.83□□□□□ -0.68
RTN3-212ENST00000543123 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 KRT77Q7Z794 578 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 CPOQ8IVL8 374 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 CANT1Q8WVQ1 401 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 OR5P3Q8WZ94 311 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 TAS2R1Q9NYW7 299 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
RTN3-212ENST00000543123 A0A0U1RQK1 487 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 A0A0U1RQV5 110 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 ZNF816-ZNF321PA0A0X1KG74 233 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.82□□□□□ -0.68
RTN3-212ENST00000543123 T-ENOLP0DO92 83 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 ATP6V1B1P15313 513 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 MAP2K3P46734 347 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 FLOT2Q14254 428 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 GDPGP1Q6ZNW5 385 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 COMMD2Q86X83 199 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 OR8B12Q8NGG6 310 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 H1FXQ92522 213 aaKnown RBP10.82□□□□□ -0.68
RTN3-212ENST00000543123 PIGCQ92535 297 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 RNF170Q96K19 258 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 CLPTM1LQ96KA5 538 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 RAB3IPQ96QF0 476 aaPredicted RBP10.82□□□□□ -0.68
RTN3-212ENST00000543123 MROQ9BYG7 248 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 YIPF3Q9GZM5 350 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 SLC25A19Q9HC21 320 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 ZNF319Q9P2F9 582 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 DNAJB9Q9UBS3 223 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 LRP12Q9Y561 859 aa10.82□□□□□ -0.68
RTN3-212ENST00000543123 M0QZ24 198 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 GYG2O15488 501 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 WIPF1O43516 503 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 GPR137BO60478 399 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 PAHP00439 452 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 IGHV4-59P01825 116 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 ALOX5APP20292 161 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 ACKR3P25106 362 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 IER3P46695 156 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 TGM4P49221 684 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 GNG3P63215 75 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 CDK5Q00535 292 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 BLMHQ13867 455 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 ZNF829Q3KNS6 432 aaPredicted RBP10.81□□□□□ -0.68
RTN3-212ENST00000543123 FAM76BQ5HYJ3 339 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 NCR3LG1Q68D85 454 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 THAP5Q7Z6K1 395 aa10.81□□□□□ -0.68
RTN3-212ENST00000543123 C8orf46Q8TAG6 207 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms