RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
TNC-212ENST00000542877 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 SLC24A4Q8NFF2 622 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 OR2V1Q8NHB1 315 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 GPR119Q8TDV5 335 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 APOBEC3DQ96AK3 386 aaPredicted RBP11.78□□□□□ -0.52
TNC-212ENST00000542877 GALMQ96C23 342 aa11.78□□□□□ -0.52
TNC-212ENST00000542877 SPACA9Q96E40 222 aaPredicted RBP11.78□□□□□ -0.52
TNC-212ENST00000542877 SFT2D2O95562 160 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 DSCR4P56555 118 aaPredicted RBP11.77□□□□□ -0.52
TNC-212ENST00000542877 PMP22Q01453 160 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 FUT7Q11130 342 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 DHRS2Q13268 280 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 CLEC9AQ6UXN8 241 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.52
TNC-212ENST00000542877 C20orf141Q9NUB4 165 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 OR5V1Q9UGF6 321 aa11.77□□□□□ -0.52
TNC-212ENST00000542877 CCDC187A0A096LP49 1063 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 C1QAP02745 245 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 HIST1H1DP16402 221 aaKnown RBP11.77□□□□□ -0.53
TNC-212ENST00000542877 MIDNQ504T8 468 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 UBE3DQ7Z6J8 389 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 LRRTM1Q86UE6 522 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.77□□□□□ -0.53
TNC-212ENST00000542877 EXTL1Q92935 676 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 KIAA1456Q9P272 454 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 FAM96BQ9Y3D0 163 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 AQP7P3A6NL99 342 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 CYC1P08574 325 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 PGA3P0DJD8 388 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 NQO2P16083 231 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 C21orf58P58505 322 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 DNAJB12Q9NXW2 375 aaKnown RBP11.77□□□□□ -0.53
TNC-212ENST00000542877 ZNF391Q9UJN7 358 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 NUP205Q92621 2012 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 SPTY2D1-AS1A0A0U1RR47 76 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 CTAG2O75638 210 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 GPR3P46089 330 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 NOVA1P51513 510 aaKnown RBP11.77□□□□□ -0.53
TNC-212ENST00000542877 TPPP2P59282 170 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 NDFIP1Q9BT67 221 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 GNB4Q9HAV0 340 aa11.77□□□□□ -0.53
TNC-212ENST00000542877 HMSDA8MTL9 139 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 IL2RAP01589 272 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 CDAP32320 146 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 DUSP2Q05923 314 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 SMIM21Q3B7S5 101 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 TMEM104Q8NE00 496 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 HMGCLL1Q8TB92 370 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 ADGRG7Q96K78 797 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 YTHDF2Q9Y5A9 579 aaKnown RBP11.76□□□□□ -0.53
TNC-212ENST00000542877 TRPM3Q9HCF6 1732 aaPredicted RBP11.76□□□□□ -0.53
TNC-212ENST00000542877 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 CD96P40200 585 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 PCBP3P57721 371 aaKnown RBP11.76□□□□□ -0.53
TNC-212ENST00000542877 PLAC9Q5JTB6 97 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 M1APQ8TC57 530 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 UBE2ZQ9H832 354 aaPredicted RBP11.76□□□□□ -0.53
TNC-212ENST00000542877 CST7O76096 145 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 MPGP29372 298 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 GNB1P62873 340 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 CEACAM16Q2WEN9 425 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 FAM219BQ5XKK7 198 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 OR10G3Q8NGC4 313 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 FOXB1Q99853 325 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 GPR37O15354 613 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 RPS16P62249 146 aaKnown RBP11.76□□□□□ -0.53
TNC-212ENST00000542877 PPP1R1AQ13522 171 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 Q7L0L9 218 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 FBXL14Q8N1E6 418 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 ADPRHL1Q8NDY3 354 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 ZC3HAV1LQ96H79 300 aaKnown RBP11.76□□□□□ -0.53
TNC-212ENST00000542877 FBXO34Q9NWN3 711 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 PHOX2AO14813 284 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 EPPINO95925 133 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 ZBTB25P24278 435 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 AKR7LQ8NHP1 331 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 ROBO4Q8WZ75 1007 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 TRIB1Q96RU8 372 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 TBX21Q9UL17 535 aa11.76□□□□□ -0.53
TNC-212ENST00000542877 LINC01387J3KSC0 135 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 PTHLHP12272 177 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 PPP1CBP62140 327 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 ZNF117Q03924 483 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 INSL4Q14641 139 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 Q8IYB0 196 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 EDEM2Q9BV94 578 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 IGHV3-64DA0A0J9YX35 117 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 J3QR89 54 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 LY86O95711 162 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 ZNF17P17021 662 aa11.75□□□□□ -0.53
TNC-212ENST00000542877 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms