RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CSAG2Q9Y5P2 127 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 PTPRBP23467 1997 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 OR6C65A6NJZ3 312 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 OR2A4O95047 310 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 LCATP04180 440 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 EDN3P14138 238 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 TNFSF10P50591 281 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 SLC10A1Q14973 349 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 PABPC1L2AQ5JQF8 200 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 IGFL2Q6UWQ7 119 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 SPSB4Q96A44 273 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 DACT3Q96B18 629 aaPredicted RBP12.32□□□□□ -0.44
LDB3-207ENST00000542786 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 OR2A7Q96R45 310 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 TM2D1Q9BX74 207 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 C1QTNF5Q9BXJ0 243 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 RANBP3Q9H6Z4 567 aaPredicted RBP12.32□□□□□ -0.44
LDB3-207ENST00000542786 CALHM2Q9HA72 323 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 GPN1Q9HCN4 374 aaPredicted RBP12.32□□□□□ -0.44
LDB3-207ENST00000542786 ITGB1BP2Q9UKP3 347 aa12.32□□□□□ -0.44
LDB3-207ENST00000542786 IGKV1-27A0A075B6S5 117 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 MEF2DQ14814 521 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 RNPS1Q15287 305 aaKnown RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 OR8B8Q15620 311 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 IDO2Q6ZQW0 420 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 NUFIP2Q7Z417 695 aaKnown RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 OR5D18Q8NGL1 313 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 SNAPC3Q92966 411 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 PIGTQ969N2 578 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 GPER1Q99527 375 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 PRDM14Q9GZV8 571 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 RGCCQ9H4X1 137 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ZNF69Q9UC07 566 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ZNF391Q9UJN7 358 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ING4Q9UNL4 249 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 LOC100509620A0A075B734 347 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ZNF780AO75290 641 aaPredicted RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 AMY2AP04746 511 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 FCGR2AP12318 317 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ARG2P78540 354 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 FAM3AP98173 230 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ZNF92Q03936 586 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 PNLIPRP3Q17RR3 467 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 ATPAF1Q5TC12 328 aaPredicted RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 ASCL4Q6XD76 172 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 BPIFB2Q8N4F0 458 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 PNLDC1Q8NA58 520 aaKnown RBP12.31□□□□□ -0.44
LDB3-207ENST00000542786 OR56B1Q8NGI3 324 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 TNFAIP8L1Q8WVP5 186 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 SPSB1Q96BD6 273 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 RAB3CQ96E17 227 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 GPR137Q96N19 417 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 MGAT4CQ9UBM8 478 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
LDB3-207ENST00000542786 FARS2O95363 451 aaKnown RBP12.3□□□□□ -0.44
LDB3-207ENST00000542786 RLN1P04808 185 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
LDB3-207ENST00000542786 MGMTP16455 207 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 TBPP20226 339 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 PRSS12P56730 875 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
LDB3-207ENST00000542786 RIPPLY1Q0D2K3 151 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 ZMYND11Q15326 602 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 OR52W1Q6IF63 320 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 MUC20Q8N307 709 aaPredicted RBP12.3□□□□□ -0.44
LDB3-207ENST00000542786 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 APH1AQ96BI3 265 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 WDR89Q96FK6 387 aaPredicted RBP12.3□□□□□ -0.44
LDB3-207ENST00000542786 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 CST11Q9H112 138 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
LDB3-207ENST00000542786 TRGV5A0A0B4J1U4 118 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 TMEM82A0PJX8 343 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 TM4SF5O14894 197 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 COX5BP10606 129 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 DHODHQ02127 395 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 FAM189A2Q15884 450 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 SLC7A5P1Q8MH63 180 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 OR10K1Q8NGX5 313 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 URM1Q9BTM9 101 aaKnown RBP12.29□□□□□ -0.44
LDB3-207ENST00000542786 POFUT1Q9H488 388 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 FAM86C1Q9NVL1 165 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 DNAJC13O75165 2243 aa12.29□□□□□ -0.44
LDB3-207ENST00000542786 SS18L1O75177 396 aaPredicted RBP12.29□□□□□ -0.44
LDB3-207ENST00000542786 IGHG3P01860 377 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms