RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 BCL2L11O43521 198 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 SNAPINO95295 136 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ITGB2P05107 769 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 NPBWR1P48145 328 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ACTBP60709 375 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ACTG1P63261 375 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 RAB12Q6IQ22 244 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 SLC25A47Q6Q0C1 308 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 OR5AS1Q8N127 324 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 ADAD2Q8NCV1 583 aaKnown RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 C19orf25Q9UFG5 118 aaPredicted RBP13.01□□□□□ -0.33
DDX55-209ENST00000542286 B3GALT1Q9Y5Z6 326 aa13.01□□□□□ -0.33
DDX55-209ENST00000542286 DNAJC13O75165 2243 aa13□□□□□ -0.33
DDX55-209ENST00000542286 ZNF878C9JN71 531 aa13□□□□□ -0.33
DDX55-209ENST00000542286 HCKP08631 526 aa13□□□□□ -0.33
DDX55-209ENST00000542286 CFPP27918 469 aa13□□□□□ -0.33
DDX55-209ENST00000542286 AVPR2P30518 371 aa13□□□□□ -0.33
DDX55-209ENST00000542286 SRSF3P84103 164 aaKnown RBP13□□□□□ -0.33
DDX55-209ENST00000542286 DHRS2Q13268 280 aa13□□□□□ -0.33
DDX55-209ENST00000542286 TMEM156Q8N614 296 aa13□□□□□ -0.33
DDX55-209ENST00000542286 ASB13Q8WXK3 278 aa13□□□□□ -0.33
DDX55-209ENST00000542286 PHYHIPLQ96FC7 376 aa13□□□□□ -0.33
DDX55-209ENST00000542286 ZNF251Q9BRH9 671 aa13□□□□□ -0.33
DDX55-209ENST00000542286 NIT2Q9NQR4 276 aa13□□□□□ -0.33
DDX55-209ENST00000542286 MBD2Q9UBB5 411 aa13□□□□□ -0.33
DDX55-209ENST00000542286 ZNF407Q9C0G0 2248 aa13□□□□□ -0.33
DDX55-209ENST00000542286 IGKV1-9A0A0C4DH69 117 aa13□□□□□ -0.33
DDX55-209ENST00000542286 LOC390937A0A1W2PQ73 354 aa13□□□□□ -0.33
DDX55-209ENST00000542286 ETV2O00321 342 aaPredicted RBP13□□□□□ -0.33
DDX55-209ENST00000542286 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
DDX55-209ENST00000542286 CBR1P16152 277 aa13□□□□□ -0.33
DDX55-209ENST00000542286 SCAND1P57086 179 aa13□□□□□ -0.33
DDX55-209ENST00000542286 QRFPP83859 136 aa13□□□□□ -0.33
DDX55-209ENST00000542286 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
DDX55-209ENST00000542286 TMPPEQ6ZT21 453 aa13□□□□□ -0.33
DDX55-209ENST00000542286 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
DDX55-209ENST00000542286 TMEM41AQ96HV5 264 aa13□□□□□ -0.33
DDX55-209ENST00000542286 CST11Q9H112 138 aa13□□□□□ -0.33
DDX55-209ENST00000542286 FN3KRPQ9HA64 309 aa13□□□□□ -0.33
DDX55-209ENST00000542286 TNFSF18Q9UNG2 199 aa13□□□□□ -0.33
DDX55-209ENST00000542286 OR2AT4A6NND4 320 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 EIF1BO60739 113 aaKnown RBP12.99□□□□□ -0.33
DDX55-209ENST00000542286 RAD51DO75771 328 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 OR2F2O95006 317 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 ACTL6AO96019 429 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 SMIM6P0DI80 62 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 AKR1C4P17516 323 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 OTX2P32243 289 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 NTF4P34130 210 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 EIF1P41567 113 aaKnown RBP12.99□□□□□ -0.33
DDX55-209ENST00000542286 OR2F1Q13607 317 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 SLC25A53Q5H9E4 307 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 TMEM105Q8N8V8 129 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 FADS6Q8N9I5 356 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 OR5D14Q8NGL3 314 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 AQP3Q92482 292 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 GUCD1Q96NT3 240 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 OXGR1Q96P68 337 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 GPER1Q99527 375 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 NOP16Q9Y3C1 178 aaKnown RBP12.99□□□□□ -0.33
DDX55-209ENST00000542286 DOCK10Q96BY6 2186 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 NBEAQ8NFP9 2946 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 AQP7P3A6NL99 342 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 ZIC3O60481 467 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 KLK3P07288 261 aaPredicted RBP12.99□□□□□ -0.33
DDX55-209ENST00000542286 FOSL1P15407 271 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 NFYBP25208 207 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 MSX1P28360 303 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 SLC22A24Q8N4F4 322 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 TMEM229BQ8NBD8 167 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 LYZL4Q96KX0 146 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 IMMP1LQ96LU5 166 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 SRXN1Q9BYN0 137 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 PLEKHA6Q9Y2H5 1048 aa12.99□□□□□ -0.33
DDX55-209ENST00000542286 A0A0J9YW62 118 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 TMEM127O75204 238 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 FAHP16930 419 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 VAMP1P23763 118 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 PPP1R1AQ13522 171 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 DEGS2Q6QHC5 323 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 KCTD9Q7L273 389 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 MAML2Q8IZL2 1156 aaPredicted RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 OR6X1Q8NH79 312 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 ZNF581Q9P0T4 197 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 MRPS28Q9Y2Q9 187 aaKnown RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 F5H0A9 414 aaPredicted RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 RFPL3SP0C7P2 107 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 FGF5P12034 268 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 ZNF345Q14585 488 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 RNASE10Q5GAN6 216 aaKnown RBP12.98□□□□□ -0.33
DDX55-209ENST00000542286 C10orf91Q5T1B1 145 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 C11orf87Q6NUJ2 197 aa12.98□□□□□ -0.33
DDX55-209ENST00000542286 OR2AE1Q8NHA4 323 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms