RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 TMED7Q9Y3B3 224 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 ADGRG4Q8IZF6 3080 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 TMEM269A0A1B0GVZ9 245 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 A0A1W2PPH5 198 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF432O94892 652 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 CD1AP06126 327 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 SLC2A1P11166 492 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 EGR3Q06889 387 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF248Q8NDW4 579 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 SEH1LQ96EE3 360 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 POLR1DQ9Y2S0 133 aa12.68□□□□□ -0.38
SFSWAP-210ENST00000541286 TRBV11-1A0A0K0K1C0 115 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF208O43345 1280 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 AHSA1O95433 338 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 PI3P19957 117 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 RPL27P61353 136 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF584Q8IVC4 421 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ASB5Q8WWX0 329 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 MEGF10Q96KG7 1140 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 SEC61A2Q9H9S3 476 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 NOSIPQ9Y314 301 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 TRAV36DV7A0A075B6V5 113 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 TRBV5-7A0A0A0MS05 114 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 LOC107986453A0A1B0GWG9 222 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 VSTM2BA6NLU5 285 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 C9J4A7 227 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ACTBP60709 375 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ACTG1P63261 375 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 CLEC9AQ6UXN8 241 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 WDSUB1Q8N9V3 476 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 CLEC1AQ8NC01 280 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 FGGYQ96C11 551 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 OR51M1Q9H341 326 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 RHOFQ9HBH0 211 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF275Q9NSD4 429 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 CSAG2Q9Y5P2 127 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 IGHV2-70P01814 119 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 LIFP15018 202 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ABOP16442 354 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 PGCP20142 388 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 TAS2R19P59542 299 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 POU3F1Q03052 451 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 GLO1Q04760 184 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF468Q5VIY5 522 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ASPHD2Q6ICH7 369 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 ACOT7LQ6ZUV0 252 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 RTN4RL2Q86UN3 420 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 AKR7LQ8NHP1 331 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 CCDC107Q8WV48 283 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 SECTM1Q8WVN6 248 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
SFSWAP-210ENST00000541286 CXorf65A6NEN9 183 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 C5orf52A6NGY3 159 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 PMPCAQ10713 525 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 ATPAF1Q5TC12 328 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 C1orf140Q5VVS0 124 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 ARMC10Q8N2F6 343 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 ARL5BQ96KC2 179 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 UPB1Q9UBR1 384 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 SULT2B1O00204 365 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 CD63P08962 238 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 GPX4P36969 197 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 EIF2S3P41091 472 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 ECH1Q13011 328 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 PPP1R1AQ13522 171 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 CARD17Q5XLA6 110 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 PPP1R32Q7Z5V6 425 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF101Q8IZC7 436 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 OR13C9Q8NGT0 318 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 JSRP1Q96MG2 331 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 PIGQQ9BRB3 760 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 PRO1933Q9H354 126 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 IGLV3-12A0A075B6K2 115 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 MSGN1A6NI15 193 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 NPIPA5E9PKD4 350 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 STMND1H3BQB6 276 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 S100PP25815 95 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 AGTR1P30556 359 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 CEBPGP53567 150 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 ZNF585AQ6P3V2 769 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 UNQ6494/PRO21346Q6UXR6 183 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 OR2Y1Q8NGV0 311 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 RRNAD1Q96FB5 475 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 SMIM3Q9BZL3 60 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 CST11Q9H112 138 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 GSKIPQ9P0R6 139 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 HHLA2Q9UM44 414 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 NPIPA1Q9UND3 350 aa12.66□□□□□ -0.38
SFSWAP-210ENST00000541286 OR2J2O76002 312 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms