RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FAM122AQ96E09 287 aa13.46□□□□□ -0.26
SMARCA4-207ENST00000541122 MBPP02686 304 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 SDHBP21912 280 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 BPIFB3P59826 476 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 BCL7CQ8WUZ0 217 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 FAM234AQ9H0X4 552 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 MMP25Q9NPA2 562 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 ING1Q9UK53 422 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 RBFOX3A6NFN3 312 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 GPR87Q9BY21 358 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 RASL12Q9NYN1 266 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 DVL1O14640 695 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 TERTO14746 1132 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 CST7O76096 145 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 PTBP3O95758 552 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 AGBL5Q8NDL9 886 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 VN1R2Q8NFZ6 395 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 ZNF596Q8TC21 504 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 TPPP3Q9BW30 176 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 TRPM3Q9HCF6 1732 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 PRDM7Q9NQW5 492 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 ZNF891A8MT65 544 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 GPANK1O95872 356 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 HPXP02790 462 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 RPL29P47914 159 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 TMEM65Q6PI78 240 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 LYPD8Q6UX82 237 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 NAA60Q9H7X0 242 aa13.45□□□□□ -0.26
SMARCA4-207ENST00000541122 C7orf77A4D0Y5 90 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 NKX6-3A6NJ46 265 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 CNEP1R1Q8N9A8 125 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 PPP1R3EQ9H7J1 279 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 PARP11Q9NR21 331 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 DUXBA0A1W2PPF3 345 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 ADH4P08319 380 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 ZNF17P17021 662 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 FAM53BQ14153 422 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 DRAM2Q6UX65 266 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 MOB1BQ7L9L4 216 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 OIT3Q8WWZ8 545 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 ERGIC1Q969X5 290 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 MUCL1Q96DR8 90 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 CALHM2Q9HA72 323 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 ETFDHQ16134 617 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 CLEC12BQ2HXU8 276 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 APH1AQ96BI3 265 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 FAM166BA8MTA8 275 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 FUT3P21217 361 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 GPR12P47775 334 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 P2RY1P47900 373 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 NOXO1Q8NFA2 376 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 PACRGQ96M98 296 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 HHIPQ96QV1 700 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 UTP23Q9BRU9 249 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 ALX4Q9H161 411 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 C20orf141Q9NUB4 165 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 MED29Q9NX70 200 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
SMARCA4-207ENST00000541122 MAP1LC3B2A6NCE7 125 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 ARR3P36575 388 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 COX19Q49B96 90 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 NCMAPQ5T1S8 102 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 JMJD6Q6NYC1 403 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 DGAT2L6Q6ZPD8 337 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 ETFBKMTQ8IXQ9 262 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 MAP1LC3BQ9GZQ8 125 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 HDGFL3Q9Y3E1 203 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 NUMA1Q14980 2115 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 PMP22Q01453 160 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 TUSC1Q2TAM9 212 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 FAM219BQ5XKK7 198 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 SLC25A42Q86VD7 318 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 WBP2Q969T9 261 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 CD207Q9UJ71 328 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 hCG_1809904A0A1W2PP81 198 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 A0A1W2PR64 198 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 A0A1W2PRV1 198 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 CNN1P51911 297 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 TMEM33P57088 247 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 IFITM2Q01629 132 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 RSRP1Q9BUV0 290 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 SMDT1Q9H4I9 107 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 NAT8Q9UHE5 227 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 ZNF391Q9UJN7 358 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 FAM221AA4D161 298 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 RSPO2Q6UXX9 243 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 ZDHHC23Q8IYP9 409 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 M1APQ8TC57 530 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 ADGRG7Q96K78 797 aa13.43□□□□□ -0.26
SMARCA4-207ENST00000541122 SCN7AQ01118 1682 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms