RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ZNF771Q7L3S4 317 aaPredicted RBP10.96□□□□□ -0.65
LTBR-208ENST00000541005 CATSPERDQ86XM0 798 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 ZDHHC23Q8IYP9 409 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 GCSAMQ8N6F7 178 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 YIPF7Q8N8F6 280 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 SEMA6DQ8NFY4 1073 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 NEIL1Q96FI4 390 aaPredicted RBP10.96□□□□□ -0.65
LTBR-208ENST00000541005 Q96MT0 163 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 TBX5Q99593 518 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 TMPRSS13Q9BYE2 586 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 FGF23Q9GZV9 251 aaPredicted RBP10.96□□□□□ -0.65
LTBR-208ENST00000541005 C1orf123Q9NWV4 160 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 EXOGQ9Y2C4 368 aaKnown RBP10.96□□□□□ -0.65
LTBR-208ENST00000541005 PCDHGB1Q9Y5G3 927 aa10.96□□□□□ -0.65
LTBR-208ENST00000541005 A0A1B0GTI1 187 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 OOEPA6NGQ2 149 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 ZNF850A8MQ14 1090 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 TNFRSF13BO14836 293 aaPredicted RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 MTRF1O75570 445 aaKnown RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 GRPP07492 148 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 DBTP11182 482 aaKnown RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 CSNK2BP67870 215 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 LCN2P80188 198 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 PAX2Q02962 417 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 ZNF91Q05481 1191 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 RIPPLY1Q0D2K3 151 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 CDONQ4KMG0 1287 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 DCAF12L2Q5VW00 463 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 TEX36Q5VZQ5 186 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 TMEM42Q69YG0 159 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 WDR82Q6UXN9 313 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 C1orf229Q6ZS94 237 aaPredicted RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 NLRC3Q7RTR2 1065 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 FAM220AQ7Z4H9 259 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 COMMD2Q86X83 199 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 EGFL6Q8IUX8 553 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 ACBD7Q8N6N7 88 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 OR8B3Q8NGG8 313 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 OR10Z1Q8NGY1 313 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 RORBQ92753 470 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 PPP1R14AQ96A00 147 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 DACT3Q96B18 629 aaPredicted RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 FAM71F1Q96KD3 344 aaPredicted RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 OR8B2Q96RD0 313 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
LTBR-208ENST00000541005 ENPP5Q9UJA9 477 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 V9GYS6 101 aa10.95□□□□□ -0.66
LTBR-208ENST00000541005 TRAV38-1A0A0B4J264 116 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 hCG_1807616A0A1W2PRN6 198 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 OR5B21A6NL26 309 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 SRRM5B3KS81 715 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 TRAPPC2LH3BP13 241 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.94□□□□□ -0.66
LTBR-208ENST00000541005 CASQ2O14958 399 aaPredicted RBP10.94□□□□□ -0.66
LTBR-208ENST00000541005 NDUFA2O43678 99 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 FAHP16930 419 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 ZNF12P17014 697 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 EGR1P18146 543 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 PEX2P28328 305 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 GNG3P63215 75 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 HOXA4Q00056 320 aaPredicted RBP10.94□□□□□ -0.66
LTBR-208ENST00000541005 CEACAM21Q3KPI0 293 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 FAHD2BQ6P2I3 314 aaPredicted RBP10.94□□□□□ -0.66
LTBR-208ENST00000541005 FDX2Q6P4F2 183 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 DOK3Q7L591 496 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 C1QL2Q7Z5L3 287 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 KCTD20Q7Z5Y7 419 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 FAM90A1Q86YD7 464 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 CCDC54Q8NEL0 328 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 ZNF555Q8NEP9 628 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 DEFB108BQ8NET1 73 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 OR14K1Q8NGZ2 314 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 LRRC29Q8WV35 223 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 APH1BQ8WW43 257 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 PIGCQ92535 297 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 LGALS12Q96DT0 336 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 FAHD2AQ96GK7 314 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 ACOXLQ9NUZ1 547 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 MRPS18AQ9NVS2 196 aaKnown RBP10.94□□□□□ -0.66
LTBR-208ENST00000541005 AASSQ9UDR5 926 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 OR5V1Q9UGF6 321 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 GTF2A1LQ9UNN4 478 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 SLC22A13Q9Y226 551 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 PIGLQ9Y2B2 252 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 INSIG2Q9Y5U4 225 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 CUBNO60494 3623 aa10.94□□□□□ -0.66
LTBR-208ENST00000541005 PHF1O43189 567 aaPredicted RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 WBP4O75554 376 aaKnown RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 RPP14O95059 124 aaKnown RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 AVPP01185 164 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 FSHBP01225 129 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 IGHA1P01876 353 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 MUC1P15941 1255 aaPredicted RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 CD80P33681 288 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 SRP14P37108 136 aaKnown RBP10.93□□□□□ -0.66
LTBR-208ENST00000541005 PITPNBP48739 271 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 NPY4RP50391 375 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 ACTA2P62736 377 aa10.93□□□□□ -0.66
LTBR-208ENST00000541005 ACTG2P63267 376 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms