RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 OGFOD3Q6PK18 319 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SLC25A42Q86VD7 318 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 ZDHHC22Q8N966 263 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 PMM1Q92871 262 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 RRNAD1Q96FB5 475 aaKnown RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 THOC3Q96J01 351 aaKnown RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 GPER1Q99527 375 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 C2orf88Q9BSF0 95 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 KCNK15Q9H427 330 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 CGGBP1Q9UFW8 167 aaPredicted RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 KCNE5Q9UJ90 142 aa7.76□□□□□ -1.17
DDB1-217ENST00000540166 SPTBN1Q01082 2364 aaKnown RBP7.76□□□□□ -1.17
DDB1-217ENST00000540166 B4E171 279 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 SYT7O43581 403 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TLX3O43711 291 aaPredicted RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 NUDT14O95848 222 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 IGHV2-5P01817 119 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 AMY2BP19961 511 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 CD1CP29017 333 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 CRABP1P29762 137 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TSPAN7P41732 249 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 CAPZBP47756 277 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 FASLGP48023 281 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 DUSP2Q05923 314 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 DEFB110Q30KQ9 67 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TRMT12Q53H54 448 aaKnown RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 DBX2Q6ZNG2 339 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 P4HA3Q7Z4N8 544 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 ZADH2Q8N4Q0 377 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 OR5H2Q8NGV7 314 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 GPX8Q8TED1 209 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 KISS1RQ969F8 398 aaPredicted RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 RBM18Q96H35 190 aaKnown RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 LINC00615Q96LM1 132 aaPredicted RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 SDF2Q99470 211 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 KMT2EQ8IZD2 1858 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 ZNF878C9JN71 531 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 SLC17A2O00624 439 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 GLCEO94923 617 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 PI3P19957 117 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 HRH1P35367 487 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 RPP30P78346 268 aaKnown RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 FUT5Q11128 374 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 RAB32Q13637 225 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 GXYLT1Q4G148 440 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 SLC35D3Q5M8T2 416 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 C10orf91Q5T1B1 145 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 SPNS3Q6ZMD2 512 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TMPPEQ6ZT21 453 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 DPY19L4Q7Z388 723 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 ADGRE4PQ86SQ3 457 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 FJX1Q86VR8 437 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 BMPERQ8N8U9 685 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 LINC01555Q8NAE3 123 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 ZNF563Q8TA94 476 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 ADAMTS17Q8TE56 1095 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 SEH1LQ96EE3 360 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 LHX9Q9NQ69 397 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 CREBBPQ92793 2442 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 J3QRE1 110 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 ADAP1O75689 374 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 EPPINO95925 133 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 RPL29P47914 159 aaKnown RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 SULT1A2P50226 295 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 CTXN1P60606 82 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TMPRSS11FQ6ZWK6 438 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TMEM104Q8NE00 496 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 OR13C3Q8NGS6 347 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 HAS2Q92819 552 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 RASD2Q96D21 266 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 C2orf50Q96LR7 162 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 DDA1Q9BW61 102 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 RSPO3Q9BXY4 272 aaPredicted RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 ELL3Q9HB65 397 aaPredicted RBP7.75□□□□□ -1.17
DDB1-217ENST00000540166 PRDM7Q9NQW5 492 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 C19orf12Q9NSK7 152 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 TIMM10BQ9Y5J6 103 aa7.75□□□□□ -1.17
DDB1-217ENST00000540166 HCKP08631 526 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 ITGA5P08648 1049 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 PPICP45877 212 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 H3F3AP84243 136 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 SQSTM1Q13501 440 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 ETFRF1Q6IPR1 90 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 KCTD18Q6PI47 426 aaPredicted RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 SNX22Q96L94 193 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 NMES1Q9C002 83 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 OPN3Q9H1Y3 402 aaPredicted RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 TRAV8-7A0A075B6U6 113 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 A0A1B0GWA3 101 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 TRGC2P03986 189 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 PRB1P04280 392 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 TSFMP43897 325 aaKnown RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 HSD17B7P56937 341 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 NUTF2P61970 127 aaKnown RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 KHDC3LQ587J8 217 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 TMEM128Q5BJH2 165 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 WDR74Q6RFH5 385 aaPredicted RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 UNQ9370/PRO34162Q6UXP9 181 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 KMT5CQ86Y97 462 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 OR2L13Q8N349 312 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms