RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 RAB5CP51148 216 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 SLC37A1P57057 533 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 OR1D5P58170 312 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 FUT7Q11130 342 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 CSRP2Q16527 193 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 LINC00114Q6XXX2 140 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 ARRDC1Q8N5I2 433 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 BORCS8Q96FH0 119 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 SYT3Q9BQG1 590 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 CD207Q9UJ71 328 aa11.52□□□□□ -0.56
MSH6-210ENST00000540021 FRG2CA6NGY1 282 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 GPR37O15354 613 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 OR5H8P0DN80 308 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
MSH6-210ENST00000540021 DCAF7P61962 342 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
MSH6-210ENST00000540021 PLXDC2Q6UX71 529 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 OR2G3Q8NGZ4 309 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 PTPMT1Q8WUK0 201 aaPredicted RBP11.52□□□□□ -0.57
MSH6-210ENST00000540021 RAB18Q9NP72 206 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 FAM221BA6H8Z2 402 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 LAP3P28838 519 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 KIR2DL1P43626 348 aaPredicted RBP11.52□□□□□ -0.57
MSH6-210ENST00000540021 OR6S1Q8NH40 331 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 EMG1Q92979 244 aaKnown RBP11.52□□□□□ -0.57
MSH6-210ENST00000540021 ELSPBP1Q96BH3 223 aa11.52□□□□□ -0.57
MSH6-210ENST00000540021 ESRP2Q9H6T0 727 aaKnown RBP11.52□□□□□ -0.57
MSH6-210ENST00000540021 CDC14BO60729 498 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 CST4P01036 141 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 RRADP55042 308 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 C17orf67Q0P5P2 114 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 OPN5Q6U736 354 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 PIGQQ9BRB3 760 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 UTP23Q9BRU9 249 aaKnown RBP11.51□□□□□ -0.57
MSH6-210ENST00000540021 YBX2Q9Y2T7 364 aaKnown RBP11.51□□□□□ -0.57
MSH6-210ENST00000540021 ADAM10O14672 748 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 GUSBP08236 651 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 GSTP1P09211 210 aaKnown RBP11.51□□□□□ -0.57
MSH6-210ENST00000540021 CSNK1A1P48729 337 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 FHITP49789 147 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 RPS18P62269 152 aaKnown RBP11.51□□□□□ -0.57
MSH6-210ENST00000540021 ANKRD55Q3KP44 614 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 RPS4Y2Q8TD47 263 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 HAS2Q92819 552 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 C8orf44Q96CB5 159 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 LRFN1Q9P244 771 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 TAAR5O14804 337 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 TBPP20226 339 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 CAPZBP47756 277 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 ZNF684Q5T5D7 378 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 SKA3Q8IX90 412 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 HDHD3Q9BSH5 251 aaPredicted RBP11.51□□□□□ -0.57
MSH6-210ENST00000540021 RTN4RQ9BZR6 473 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 NMES1Q9C002 83 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 FGF21Q9NSA1 209 aa11.51□□□□□ -0.57
MSH6-210ENST00000540021 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 ZNF705GA8MUZ8 300 aaPredicted RBP11.5□□□□□ -0.57
MSH6-210ENST00000540021 SPRY1O43609 319 aaPredicted RBP11.5□□□□□ -0.57
MSH6-210ENST00000540021 TTRP02766 147 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 FPR2P25090 351 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 TLE1Q04724 770 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 GGNBP1Q5YKI7 109 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 DHRS11Q6UWP2 260 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 TMEM123Q8N131 208 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 PRR18Q8N4B5 295 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 RTN4IP1Q8WWV3 396 aaPredicted RBP11.5□□□□□ -0.57
MSH6-210ENST00000540021 MRPL24Q96A35 216 aaKnown RBP11.5□□□□□ -0.57
MSH6-210ENST00000540021 IP6K3Q96PC2 410 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 SOX7Q9BT81 388 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 FBRSQ9HAH7 460 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 AHCTF1Q8WYP5 2266 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 A0A1W2PQF6 199 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 MT-ND4LP03901 98 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 S100GP29377 79 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 B2MP61769 119 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 HMGN3Q15651 99 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 CLEC12BQ2HXU8 276 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 RSPO4Q2I0M5 234 aaPredicted RBP11.5□□□□□ -0.57
MSH6-210ENST00000540021 RCC2Q9P258 522 aaKnown RBP11.5□□□□□ -0.57
MSH6-210ENST00000540021 BLACEA4D250 179 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 TLCD2A6NGC4 264 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 ALDH3B1P43353 468 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 UNC119Q13432 240 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 KISS1Q15726 138 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 LRRC61Q9BV99 259 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 C5orf66Q9H5L9 145 aa11.5□□□□□ -0.57
MSH6-210ENST00000540021 IGLV1-36A0A0B4J1U3 117 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ZNF724A8MTY0 619 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 DUX1O43812 170 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 TRAPPC6AO75865 159 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 CST7O76096 145 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 YIF1AO95070 293 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
MSH6-210ENST00000540021 CSNK1EP49674 416 aaKnown RBP11.49□□□□□ -0.57
MSH6-210ENST00000540021 Q7L0L9 218 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms