RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SFRP4Q6FHJ7 346 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 FAHD2BQ6P2I3 314 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 C1orf229Q6ZS94 237 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 PRSS35Q8N3Z0 413 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 FTMTQ8N4E7 242 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 GCSAMQ8N6F7 178 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 SEMA6DQ8NFY4 1073 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 FAHD2AQ96GK7 314 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 NKX1-2Q9UD57 310 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 GNG8Q9UK08 70 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 PIGLQ9Y2B2 252 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 MYRFQ9Y2G1 1151 aa15.3■□□□□ 0.04
SNRPA1-203ENST00000540017 hCG_1807616A0A1W2PRN6 198 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 DAPL1A0PJW8 107 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 ANXA2P2A6NMY6 339 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 TRAPPC2LH3BP13 241 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 CASQ2O14958 399 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 PHF1O43189 567 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 DHRS3O75911 302 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 ATP6V1B1P15313 513 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 KIR3DL2P43630 455 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 OR12D2P58182 307 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 RIPPLY1Q0D2K3 151 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 SMN1Q16637 294 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 CDONQ4KMG0 1287 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 CEP78Q5JTW2 689 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 OGFRL1Q5TC84 451 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 WDR82Q6UXN9 313 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 Q6ZSR3 168 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 ZDHHC23Q8IYP9 409 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 PACRGLQ8N7B6 248 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF555Q8NEP9 628 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 OR14K1Q8NGZ2 314 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 RPL3LQ92901 407 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 RNF170Q96K19 258 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 MICU1Q9BPX6 476 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 RTL8AQ9BWD3 113 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 TMPRSS13Q9BYE2 586 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 TLNRD1Q9H1K6 362 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 MMP26Q9NRE1 261 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 V9GYS6 101 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 MXRA5Q9NR99 2828 aa15.29■□□□□ 0.04
SNRPA1-203ENST00000540017 A6NIN4 97 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 SNTNA6NMZ2 147 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 H3BSH0 61 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 LGALS8O00214 317 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 CDIPTO14735 213 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 TNFRSF13BO14836 293 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 RPS2P15880 293 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 SRD5A1P18405 259 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 HNF1AP20823 631 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 GPM6AP51674 278 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 ACTC1P68032 377 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 ACTA1P68133 377 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 ADARB1P78563 741 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 FAM76BQ5HYJ3 339 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 WDR38Q5JTN6 314 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF691Q5VV52 312 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 ACBD7Q8N6N7 88 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 LRRC29Q8WV35 223 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 CYGBQ8WWM9 190 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 Q96MT0 163 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF649Q9BS31 505 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 MIOXQ9UGB7 285 aa15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 POLR3KQ9Y2Y1 108 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-203ENST00000540017 IGHV3OR15-7A0A075B7D8 119 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 A8MXK9 166 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 FOXH1O75593 365 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 PCMT1P22061 227 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 CCL1P22362 96 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 CEACAM21Q3KPI0 293 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ESCO2Q56NI9 601 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ZBTB37Q5TC79 503 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 DCAF12L2Q5VW00 463 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 TMEM42Q69YG0 159 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ZNF841Q6ZN19 808 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 DCDC5Q6ZRR9 648 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 MOB3CQ70IA8 216 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 THAP5Q7Z6K1 395 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 LHFPL3Q86UP9 236 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 SCCPDHQ8NBX0 429 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 CNIH3Q8TBE1 160 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ITFG2Q969R8 447 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 SEH1LQ96EE3 360 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 NEIL1Q96FI4 390 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 DCLRE1BQ9H816 532 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 RNPEPL1Q9HAU8 725 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ABCB9Q9NP78 766 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 C8orf4Q9NR00 106 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 MRPS18AQ9NVS2 196 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 CTSZQ9UBR2 303 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 ENPP5Q9UJA9 477 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 PCDHGB1Q9Y5G3 927 aa15.27■□□□□ 0.04
SNRPA1-203ENST00000540017 OOEPA6NGQ2 149 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 MTRF1O75570 445 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 IGHA1P01876 353 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 CFHR2P36980 270 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 NANOS3P60323 173 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms