RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 OR2T33Q8NG76 320 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 OR9A4Q8NGU2 314 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 OR2AE1Q8NHA4 323 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 CT45A3Q8NHU0 189 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 RPLP0P6Q8NHW5 317 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 SFXN5Q8TD22 340 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ADAMTS16Q8TE57 1224 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 DOK4Q8TEW6 326 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNRF4Q8WWF5 429 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 NDRG1Q92597 394 aaKnown RBP3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 SEC22AQ96IW7 307 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ADTRPQ96IZ2 230 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 C2orf48Q96LS8 159 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 Q96MT0 163 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 SORT1Q99523 831 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 TEAD3Q99594 435 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 NIPSNAP1Q9BPW8 284 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 AGMATQ9BSE5 352 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 CALN1Q9BXU9 219 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ULBP1Q9BZM6 244 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 DSN1Q9H410 356 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 SIAEQ9HAT2 523 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 RDH14Q9HBH5 336 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 MEPEQ9NQ76 525 aaPredicted RBP3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 CTPS2Q9NRF8 586 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 EHFQ9NZC4 300 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 NUDT4Q9NZJ9 180 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 DUX4Q9UBX2 424 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 NTNG1Q9Y2I2 539 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ARL5AQ9Y689 179 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF236Q9UL36 1845 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 MAPK8IP3Q9UPT6 1336 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 GREB1Q4ZG55 1949 aa3.13□□□□□ -1.91
AC055720.1-201ENST00000539552 ANKRD36CQ5JPF3 1778 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 EDC4Q6P2E9 1401 aaKnown RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 IGHV4OR15-8A0A075B7B6 117 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 KIR2DL5BA0A0G2JN68 375 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 KIR2DL5BA0A0G2JPC4 375 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 GJE1A6NN92 205 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 C21orf140B9A014 251 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF587BE7ETH6 402 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 K7ERI5 159 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 DFFAO00273 331 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF593O00488 134 aaPredicted RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ACOT8O14734 319 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CDIPTO14735 213 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SURF4O15260 269 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CRXO43186 299 aaPredicted RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ENSAO43768 121 aaKnown RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SSNA1O43805 119 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 FADS1O60427 444 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SHOX2O60902 331 aaPredicted RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SEC24AO95486 1093 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 BCHEP06276 602 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 MELTFP08582 738 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 LIMS3P0CW19 117 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 LIMS4P0CW20 117 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 TBPP20226 339 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 FUT3P21217 361 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CALML3P27482 149 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 GNRHRP30968 328 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 OMPP47874 163 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CSRP3P50461 194 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 AP2S1P53680 142 aaPredicted RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 HCCSP53701 268 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 PAFAH1B2P68402 229 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 FAM3AP98173 230 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ST3GAL4Q11206 333 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF154Q13106 437 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 LY6DQ14210 128 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SLC9A3R2Q15599 337 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZIC1Q15915 447 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZCWPW2Q504Y3 356 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 OR10J3Q5JRS4 329 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CCNJQ5T5M9 372 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 HACD4Q5VWC8 232 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 MEDAGQ5VYS4 303 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 MED27Q6P2C8 311 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF549Q6P9A3 640 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 TRIM40Q6P9F5 258 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 WDR82Q6UXN9 313 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 MBOAT2Q6ZWT7 520 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 RBM23Q86U06 439 aaKnown RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 PUSL1Q8N0Z8 303 aaKnown RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 KIR2DL5AQ8N109 375 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF114Q8NC26 417 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 KIR2DL5BQ8NHK3 375 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SECTM1Q8WVN6 248 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 RASL10AQ92737 203 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CREB3L1Q96BA8 519 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 TLCD1Q96CP7 247 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 SMIM19Q96E16 107 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 WBP1Q96G27 269 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF681Q96N22 645 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 TBX15Q96SF7 602 aa3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 TSNAXQ99598 290 aaKnown RBP3.12□□□□□ -1.91
AC055720.1-201ENST00000539552 CGREF1Q99674 301 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms