RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PLEKHB1Q9UF11 243 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-207ENST00000539047 CMAHPQ9Y471 501 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 ATP23Q9Y6H3 246 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 PCNX1Q96RV3 2341 aa13.25□□□□□ -0.29
VAMP1-207ENST00000539047 A0A0G2JK05 382 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 ZNF850A8MQ14 1090 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 IQCF6A8MYZ5 107 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 GMDSO60547 372 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 CALCBP10092 127 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 HTR2CP28335 458 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 FUT6P51993 359 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 ATP1B3P54709 279 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 PRSS12P56730 875 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 ERVS71-1P61550 626 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 NCMAPQ5T1S8 102 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 TMEM42Q69YG0 159 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 VHLLQ6RSH7 139 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 OR8S1Q8NH09 359 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 TRMT10AQ8TBZ6 339 aaKnown RBP13.24□□□□□ -0.29
VAMP1-207ENST00000539047 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 PLPPR2Q96GM1 343 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 GPR160Q9UJ42 338 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 PURGQ9UJV8 347 aaKnown RBP13.24□□□□□ -0.29
VAMP1-207ENST00000539047 RHBDD3Q9Y3P4 386 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 ETV7Q9Y603 341 aa13.24□□□□□ -0.29
VAMP1-207ENST00000539047 DIDO1Q9BTC0 2240 aaKnown RBP13.23□□□□□ -0.29
VAMP1-207ENST00000539047 FAM230AA0A1W2PPH8 454 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 PLSCR5A0PG75 271 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 DPRXA6NFQ7 191 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 OR5B21A6NL26 309 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
VAMP1-207ENST00000539047 PRF1P14222 555 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 KITLGP21583 273 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 CFPP27918 469 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 GRNP28799 593 aaKnown RBP13.23□□□□□ -0.29
VAMP1-207ENST00000539047 TALDO1P37837 337 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 KIR2DL3P43628 341 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 RBP2P50120 134 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 FABP6P51161 128 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 TFF3Q07654 80 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 TNK1Q13470 666 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 RIN1Q13671 783 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 NR2C2APQ86WQ0 139 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 OR52N4Q8NGI2 321 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 UBASH3BQ8TF42 649 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 MICU1Q9BPX6 476 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 ADAT1Q9BUB4 502 aaKnown RBP13.23□□□□□ -0.29
VAMP1-207ENST00000539047 RTL8AQ9BWD3 113 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 LIN7BQ9HAP6 207 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
VAMP1-207ENST00000539047 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
VAMP1-207ENST00000539047 UTP20O75691 2785 aaKnown RBP13.22□□□□□ -0.29
VAMP1-207ENST00000539047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-207ENST00000539047 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 FAM25AB3EWG3 89 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 FAM25CB3EWG5 89 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 FAM25GB3EWG6 89 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 CYB5AP00167 134 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 UBBP0CG47 229 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 MPV17P39210 176 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 BMXP51813 675 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 MTCP1P56278 107 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 NKX6-1P78426 367 aaPredicted RBP13.22□□□□□ -0.29
VAMP1-207ENST00000539047 PSG7Q13046 419 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 LSAMPQ13449 338 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 CDSNQ15517 529 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 OR8G1Q15617 311 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 KISS1Q15726 138 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 UBE2V2Q15819 145 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 CEACAM21Q3KPI0 293 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 AWAT2Q6E213 333 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 ADAM5Q6NVV9 412 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 C22orf34Q6ZV56 151 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 OR8G5Q8NG78 346 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 OR6Q1Q8NGQ2 317 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 LGALS14Q8TCE9 139 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 PHF21AQ96BD5 680 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 GFI1Q99684 422 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 SLC30A2Q9BRI3 323 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 ZNF442Q9H7R0 627 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 TMEM100Q9NV29 134 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 DUSP13Q9UII6 198 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 MRPS28Q9Y2Q9 187 aaKnown RBP13.22□□□□□ -0.29
VAMP1-207ENST00000539047 PMF1-BGLAPU3KQ54 211 aa13.22□□□□□ -0.29
VAMP1-207ENST00000539047 BPNT1O95861 308 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 ZNF250P15622 560 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 ARSBP15848 533 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 CA6P23280 308 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 P2RY14Q15391 338 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 FAM189A2Q15884 450 aa13.21□□□□□ -0.29
VAMP1-207ENST00000539047 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms