RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ERVK-18	Q9QC07	812 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	CLN8	Q9UBY8	286 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	OPN4	Q9UHM6	478 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	IKZF2	Q9UKS7	526 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	N6AMT1	Q9Y5N5	214 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	SNX5	Q9Y5X3	404 aa		10.28	□□□□□ -0.76
CLTCL1-205	ENST00000538828	IGHV2-70D	A0A0C4DH43	119 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KIR2DS1	A0A191URI9	304 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828		A6NLC8	198 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PRR32	B1ATL7	298 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LOC110117498-PIK3R3	F6TDL0	507 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TRAPPC2L	H3BP13	241 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ECD	O95905	644 aa	Predicted RBP	10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	AVP	P01185	164 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KRT8	P05787	483 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GRP	P07492	148 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CCL1	P22362	96 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	BPIFB3	P59826	476 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GNG3	P63215	75 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ACTC1	P68032	377 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ACTA1	P68133	377 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MICB	Q29980	383 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CEACAM21	Q3KPI0	293 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	WDR25	Q64LD2	544 aa	Predicted RBP	10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	WDR82	Q6UXN9	313 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PLEKHG7	Q6ZR37	379 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZDHHC23	Q8IYP9	409 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CBR4	Q8N4T8	237 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SEMA6D	Q8NFY4	1073 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OR51G2	Q8NGK0	314 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM81A	Q8TBF8	368 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF418	Q8TF45	676 aa	Predicted RBP	10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	C10orf35	Q96D05	121 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	HIST1H2AA	Q96QV6	131 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MRM2	Q9UI43	246 aa	Known RBP	10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	AUP1	Q9Y679	476 aa		10.27	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CUBN	O60494	3623 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	METTL15	A6NJ78	407 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RNF212B	A8MTL3	300 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	DLGAP1	O14490	977 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SLC16A6	O15403	523 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ENSA	O43768	121 aa	Known RBP	10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TTR	P02766	147 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RPSA	P08865	295 aa	Known RBP	10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	EPHA1	P21709	976 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FPR2	P25090	351 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MTNR1A	P48039	350 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ISL1	P61371	349 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SEC61A1	P61619	476 aa	Known RBP	10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PRDX4	Q13162	271 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZSCAN26	Q16670	478 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GFOD2	Q3B7J2	385 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TMEM42	Q69YG0	159 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZBTB49	Q6ZSB9	765 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	WDR86	Q86TI4	376 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	UPRT	Q96BW1	309 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TECTB	Q96PL2	329 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GPR84	Q9NQS5	396 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MMP26	Q9NRE1	261 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ENPP5	Q9UJA9	477 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OR52A1	Q9UKL2	312 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828		V9GYS6	101 aa		10.26	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LOC105371242	A0A075B767	164 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828		A0A1W2PQL4	384 aa	Predicted RBP	10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	hCG_1807616	A0A1W2PRN6	198 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF850	A8MQ14	1090 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828		J3QRE1	110 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828		M0R129	80 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ACAA1	P09110	424 aa	Predicted RBP	10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GABRB1	P18505	474 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ATP6V1E1	P36543	226 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	HILS1	P60008	231 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM201A	Q5SY85	155 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	BCL2L15	Q5TBC7	163 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FDX2	Q6P4F2	183 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	C9orf139	Q6ZV77	190 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	DOK3	Q7L591	496 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SLC36A1	Q7Z2H8	476 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	THAP5	Q7Z6K1	395 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM90A1	Q86YD7	464 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF671	Q8TAW3	534 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OR51E1	Q8TCB6	317 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	HAVCR2	Q8TDQ0	301 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	HPSE2	Q8WWQ2	592 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PIGC	Q92535	297 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	DVL3	Q92997	716 aa	Predicted RBP	10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MRPL48	Q96GC5	212 aa	Known RBP	10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RNF170	Q96K19	258 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828		Q96MT0	163 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	APOL4	Q9BPW4	351 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SUCNR1	Q9BXA5	334 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MRPS18A	Q9NVS2	196 aa	Known RBP	10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	NUP50	Q9UKX7	468 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SLC22A13	Q9Y226	551 aa		10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	EXOG	Q9Y2C4	368 aa	Known RBP	10.25	□□□□□ -0.77
CLTCL1-205	ENST00000538828	IGHV3-64D	A0A0J9YX35	117 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828		A0A1B0GTI1	187 aa		10.24	□□□□□ -0.77

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