RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CARD18P57730 90 aa21.81■■□□□ 1.08
RAB40C-204ENST00000538492 OR2AE1Q8NHA4 323 aa21.81■■□□□ 1.08
RAB40C-204ENST00000538492 CHST5Q9GZS9 411 aa21.81■■□□□ 1.08
RAB40C-204ENST00000538492 TRAPPC6AO75865 159 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 PI3P19957 117 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 BLVRBP30043 206 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-204ENST00000538492 CALCRP30988 508 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 FAM27BQ5VT28 67 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 FAHD2BQ6P2I3 314 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-204ENST00000538492 SPTSSAQ969W0 71 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 FAHD2AQ96GK7 314 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 WDR13Q9H1Z4 485 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 ANAPC10Q9UM13 185 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 TNFSF18Q9UNG2 199 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 CCDC187A0A096LP49 1063 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 MFSD2BA6NFX1 497 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 PATE4P0C8F1 98 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 NAT1P18440 290 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 SRD5A2P31213 254 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 SUCLG1P53597 346 aaKnown RBP21.8■■□□□ 1.08
RAB40C-204ENST00000538492 ZXDAP98168 799 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 RIPPLY1Q0D2K3 151 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 BAMBIQ13145 260 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 PNLIPRP3Q17RR3 467 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 TMEM65Q6PI78 240 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 RELL2Q8NC24 303 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-204ENST00000538492 C17orf50Q8WW18 174 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 PP6455Q8WZ26 134 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 ALKBH3Q96Q83 286 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-204ENST00000538492 S100A13Q99584 98 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 COQ3Q9NZJ6 369 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 FLVCR1Q9Y5Y0 555 aa21.8■■□□□ 1.08
RAB40C-204ENST00000538492 DUS4LO95620 317 aaKnown RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 AMY2BP19961 511 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 MRPS34P82930 218 aaKnown RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 TIPARPQ7Z3E1 657 aaKnown RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 GGNQ86UU5 652 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 ARMC10Q8N2F6 343 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 FAM89BQ8N5H3 189 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 ESX1Q8N693 406 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 OR5H2Q8NGV7 314 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 SGK3Q96BR1 496 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 OCSTAMPQ9BR26 566 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 C13orf42A0A1B0GVH6 325 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 SDCBPO00560 298 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 CXCL13O43927 109 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 NAT2P11245 290 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 HLA-GP17693 338 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 WIPI1Q5MNZ9 446 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 OR5M9Q8NGP3 310 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 INTS12Q96CB8 462 aaKnown RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 VRK1Q99986 396 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-204ENST00000538492 C5orf66Q9H5L9 145 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 LOXL2Q9Y4K0 774 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 KCNMB2Q9Y691 235 aa21.79■■□□□ 1.08
RAB40C-204ENST00000538492 A0A0D9SG52 128 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 KCNAB3O43448 404 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 SGCEO43556 437 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 FAM189A2Q15884 450 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 VAX1Q5SQQ9 334 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 ZNF774Q6NX45 483 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-204ENST00000538492 GPR173Q9NS66 373 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 C5orf51A6NDU8 294 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 MTRF1O75570 445 aaKnown RBP21.78■■□□□ 1.08
RAB40C-204ENST00000538492 HTR3BO95264 441 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 B4GALT1P15291 398 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 DLSTP36957 453 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 ARPC4P59998 168 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 JMJD6Q6NYC1 403 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-204ENST00000538492 CT55Q8WUE5 264 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 ST8SIA2Q92186 375 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 HAS2Q92819 552 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 SF3B5Q9BWJ5 86 aaKnown RBP21.78■■□□□ 1.08
RAB40C-204ENST00000538492 DEPPQ9NTK1 212 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 PRR13Q9NZ81 148 aa21.78■■□□□ 1.08
RAB40C-204ENST00000538492 B4E171 279 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 HPNP05981 417 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 TSPAN7P41732 249 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 HGFACQ04756 655 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 ACER2Q5QJU3 275 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 ARRDC1Q8N5I2 433 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 OR1S1Q8NH92 325 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 RHBDD1Q8TEB9 315 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 LINC00052Q96N35 136 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 PCDHGA1Q9Y5H4 931 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 DOCK10Q96BY6 2186 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 RNF222A6NCQ9 220 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 LRRC3CA6NJW4 275 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 SLC25A4P12235 298 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 ACKR3P25106 362 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 SNU13P55769 128 aaKnown RBP21.77■■□□□ 1.08
RAB40C-204ENST00000538492 FAM74A1Q5RGS3 127 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 KCNRGQ8N5I3 272 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 TMEM105Q8N8V8 129 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 PECRQ9BY49 303 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 GHRLQ9UBU3 117 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 PFDN2Q9UHV9 154 aa21.77■■□□□ 1.08
RAB40C-204ENST00000538492 GPR132Q9UNW8 380 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms