RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FAM183AA6NL82 134 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 AQP12BA6NM10 295 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 H3BN98 237 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.13□□□□□ -1.27
DDB1-212ENST00000538470 M0QZ24 198 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 EBAG9O00559 213 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 TIMM23O14925 209 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 KCNAB3O43448 404 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 NDUFB3O43676 98 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 GPR137BO60478 399 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 FCN3O75636 299 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 CST4P01036 141 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 FBP1P09467 338 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 ARF6P62330 175 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 CSNK2BP67870 215 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 RELBQ01201 579 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 GFOD2Q3B7J2 385 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 LRRC10Q5BKY1 277 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 SLC35D3Q5M8T2 416 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 ATPAF1Q5TC12 328 aaPredicted RBP7.13□□□□□ -1.27
DDB1-212ENST00000538470 C1orf146Q5VVC0 180 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 BRICD5Q6PL45 260 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 VMO1Q7Z5L0 202 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.13□□□□□ -1.27
DDB1-212ENST00000538470 AQP12AQ8IXF9 295 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 C11orf53Q8IXP5 236 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 PAPD5Q8NDF8 572 aaKnown RBP7.13□□□□□ -1.27
DDB1-212ENST00000538470 OTOSQ8NHW6 89 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 GIPC3Q8TF64 312 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 SGK3Q96BR1 496 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 NIPSNAP1Q9BPW8 284 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 DPAGT1Q9H3H5 408 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 DNAJC27Q9NZQ0 273 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 ZNRD1Q9P1U0 126 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 ONECUT1Q9UBC0 465 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 DNAJB11Q9UBS4 358 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 N6AMT1Q9Y5N5 214 aa7.13□□□□□ -1.27
DDB1-212ENST00000538470 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 A0A0U1RQK1 487 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 ACOD1A6NK06 481 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 PRR23D1E9PI22 279 aaPredicted RBP7.12□□□□□ -1.27
DDB1-212ENST00000538470 GNGT2O14610 69 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CIB2O75838 187 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CLPXO76031 633 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CST1P01037 141 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 HMGN1P05114 100 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 PRR23D2P0DMB1 279 aaPredicted RBP7.12□□□□□ -1.27
DDB1-212ENST00000538470 IER3P46695 156 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CAV3P56539 151 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 PRDX4Q13162 271 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 PDLIM3Q53GG5 364 aaPredicted RBP7.12□□□□□ -1.27
DDB1-212ENST00000538470 IQCF1Q8N6M8 205 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 FAM216BQ8N7L0 139 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CANT1Q8WVQ1 401 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 DNAJC9Q8WXX5 260 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 OR5P3Q8WZ94 311 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
DDB1-212ENST00000538470 OTULINQ96BN8 352 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 RAB3IPQ96QF0 476 aaPredicted RBP7.12□□□□□ -1.27
DDB1-212ENST00000538470 AMELYQ99218 206 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 FEVQ99581 238 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CCL13Q99616 98 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 DCTN5Q9BTE1 182 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 CHID1Q9BWS9 393 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 TEX12Q9BXU0 123 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 RASSF4Q9H2L5 321 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 MMP27Q9H306 513 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 MED20Q9H944 212 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 TNFRSF19Q9NS68 423 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 HAO2Q9NYQ3 351 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 RHBDD3Q9Y3P4 386 aa7.12□□□□□ -1.27
DDB1-212ENST00000538470 TET2Q6N021 2002 aaPredicted RBP7.11□□□□□ -1.27
DDB1-212ENST00000538470 VWFP04275 2813 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 A0A0U1RQV5 110 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 A0A1B0GW55 424 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 TCRBV3S1A0A5B6 114 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 OR5B21A6NL26 309 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 M0R1W7 72 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 CDIPTO14735 213 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 SIGLEC5O15389 551 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 FKBP6O75344 327 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 E2F6O75461 281 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 IGHV4-59P01825 116 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DUX4L2P0CJ85 424 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DUX4L3P0CJ86 424 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DUX4L4P0CJ87 422 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DUX4L5P0CJ88 424 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DUX4L6P0CJ89 424 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DUX4L7P0CJ90 424 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 OSMP13725 252 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 ATP6V1B1P15313 513 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 EEF1B2P24534 225 aaKnown RBP7.11□□□□□ -1.27
DDB1-212ENST00000538470 ACKR3P25106 362 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 TGM4P49221 684 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 PROK1P58294 105 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 FAM76BQ5HYJ3 339 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 NCR3LG1Q68D85 454 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DHRS7BQ6IAN0 325 aaPredicted RBP7.11□□□□□ -1.27
DDB1-212ENST00000538470 PLBD1Q6P4A8 553 aa7.11□□□□□ -1.27
DDB1-212ENST00000538470 DEGS2Q6QHC5 323 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms