RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ZNF540Q8NDQ6 660 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 OR52N1Q8NH53 320 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 ZFAND2BQ8WV99 257 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 GATAD2BQ8WXI9 593 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 OR5P3Q8WZ94 311 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 PIGCQ92535 297 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 SEH1LQ96EE3 360 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 TMEM106BQ9NUM4 274 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 FBXO9Q9UK97 447 aaPredicted RBP11.01□□□□□ -0.65
CHFR-216ENST00000538235 CAB39Q9Y376 341 aaPredicted RBP11.01□□□□□ -0.65
CHFR-216ENST00000538235 WIPI2Q9Y4P8 454 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 LRRC42Q9Y546 428 aa11.01□□□□□ -0.65
CHFR-216ENST00000538235 DOCK11Q5JSL3 2073 aa11□□□□□ -0.65
CHFR-216ENST00000538235 MTORP42345 2549 aa11□□□□□ -0.65
CHFR-216ENST00000538235 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
CHFR-216ENST00000538235 ZNF816-ZNF321PA0A0X1KG74 233 aa11□□□□□ -0.65
CHFR-216ENST00000538235 TPD52L2O43399 206 aaKnown RBP11□□□□□ -0.65
CHFR-216ENST00000538235 IGHV2-70P01814 119 aa11□□□□□ -0.65
CHFR-216ENST00000538235 MT-ND5P03915 603 aa11□□□□□ -0.65
CHFR-216ENST00000538235 TFF1P04155 84 aa11□□□□□ -0.65
CHFR-216ENST00000538235 TACSTD2P09758 323 aa11□□□□□ -0.65
CHFR-216ENST00000538235 CCDC159P0C7I6 412 aa11□□□□□ -0.65
CHFR-216ENST00000538235 CD80P33681 288 aa11□□□□□ -0.65
CHFR-216ENST00000538235 DDOSTP39656 456 aa11□□□□□ -0.65
CHFR-216ENST00000538235 MAP2K4P45985 399 aa11□□□□□ -0.65
CHFR-216ENST00000538235 TGM4P49221 684 aa11□□□□□ -0.65
CHFR-216ENST00000538235 CCR9P51686 369 aa11□□□□□ -0.65
CHFR-216ENST00000538235 RPS11P62280 158 aaKnown RBP eCLIP11□□□□□ -0.65
CHFR-216ENST00000538235 UBE2V2Q15819 145 aa11□□□□□ -0.65
CHFR-216ENST00000538235 MOGQ16653 247 aa11□□□□□ -0.65
CHFR-216ENST00000538235 DMKNQ6E0U4 476 aaPredicted RBP11□□□□□ -0.65
CHFR-216ENST00000538235 DOK3Q7L591 496 aa11□□□□□ -0.65
CHFR-216ENST00000538235 KLHL36Q8N4N3 616 aa11□□□□□ -0.65
CHFR-216ENST00000538235 NANOGP1Q8N7R0 232 aa11□□□□□ -0.65
CHFR-216ENST00000538235 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
CHFR-216ENST00000538235 CLDND2Q8NHS1 167 aa11□□□□□ -0.65
CHFR-216ENST00000538235 CCL17Q92583 94 aa11□□□□□ -0.65
CHFR-216ENST00000538235 DIRC2Q96SL1 478 aa11□□□□□ -0.65
CHFR-216ENST00000538235 NKX3-1Q99801 234 aaPredicted RBP11□□□□□ -0.65
CHFR-216ENST00000538235 PIMREGQ9BSJ6 248 aa11□□□□□ -0.65
CHFR-216ENST00000538235 TLNRD1Q9H1K6 362 aa11□□□□□ -0.65
CHFR-216ENST00000538235 SP140LQ9H930 580 aa11□□□□□ -0.65
CHFR-216ENST00000538235 MYOZ1Q9NP98 299 aaPredicted RBP11□□□□□ -0.65
CHFR-216ENST00000538235 DECR2Q9NUI1 292 aa11□□□□□ -0.65
CHFR-216ENST00000538235 SVEP1Q4LDE5 3571 aa11□□□□□ -0.65
CHFR-216ENST00000538235 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
CHFR-216ENST00000538235 PNMA8CA0A1B0GUJ8 204 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 A0A1B0GW55 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 ANKRD30BLA7E2S9 258 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 FAM157AC9JC47 383 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 TMEM178BH3BS89 294 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 OGG1O15527 345 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 SYT7O43581 403 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 GMDSO60547 372 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 RHBDL1O75783 438 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 ISG15P05161 165 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 CSF3P09919 207 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 UBCP0CG48 685 aaKnown RBP10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L2P0CJ85 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L3P0CJ86 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L4P0CJ87 422 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L5P0CJ88 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L6P0CJ89 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L7P0CJ90 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 CD99P14209 185 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 CFL1P23528 166 aaKnown RBP10.99□□□□□ -0.65
CHFR-216ENST00000538235 MAP2K3P46734 347 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 CDH15P55291 814 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 SEC61A1P61619 476 aaKnown RBP10.99□□□□□ -0.65
CHFR-216ENST00000538235 LMO4P61968 165 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 INSL4Q14641 139 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4L9Q6RFH8 374 aaPredicted RBP10.99□□□□□ -0.65
CHFR-216ENST00000538235 KCTD20Q7Z5Y7 419 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 STX19Q8N4C7 294 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 GCSAMQ8N6F7 178 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 CSNK2A3Q8NEV1 391 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 OR1M1Q8NGA1 313 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 Q8TCH9 128 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 NPRL2Q8WTW4 380 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 RPL3LQ92901 407 aaKnown RBP10.99□□□□□ -0.65
CHFR-216ENST00000538235 C18orf12Q96KH6 178 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 CDCA4Q9BXL8 241 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 FAM192AQ9GZU8 254 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DUX4Q9UBX2 424 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 ZNF391Q9UJN7 358 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 PPP1R3CQ9UQK1 317 aa10.99□□□□□ -0.65
CHFR-216ENST00000538235 DSCAML1Q8TD84 2053 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 A0A1B0GVI7 797 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 ANKRD61A6NGH8 418 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 NDUFS8O00217 210 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 PPIHO43447 177 aaKnown RBP10.98□□□□□ -0.65
CHFR-216ENST00000538235 LY6G6DO95868 133 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 GRPP07492 148 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 RPSAP08865 295 aaKnown RBP10.98□□□□□ -0.65
CHFR-216ENST00000538235 INHBBP09529 407 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 IGHV4-31P0DP07 118 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 SLC25A16P16260 332 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 MYL12AP19105 171 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 AMY2BP19961 511 aa10.98□□□□□ -0.65
CHFR-216ENST00000538235 GPR6P46095 362 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms