RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SIGLEC9Q9Y336 463 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 KLF12Q9Y4X4 402 aa3.22□□□□□ -1.89
PRKDC-208ENST00000536710 IGHV3-49A0A0A0MS15 119 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 CENPVL3A0A0U1RRI6 287 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 LINC01619G3V211 115 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 PLIN3O60664 434 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 RHOCP08134 193 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 SLC35G6P0C7Q6 338 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 CD9P21926 228 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 DEKP35659 375 aaKnown RBP3.21□□□□□ -1.9
PRKDC-208ENST00000536710 C2orf54Q08AI8 447 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 INCA1Q0VD86 236 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 NDUFAF6Q330K2 333 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 TMEM236Q5W0B7 351 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 STEAP4Q687X5 459 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 ERO1BQ86YB8 467 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 DRAM1Q8N682 238 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 OR5T1Q8NG75 326 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 OR51A7Q8NH64 312 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 NDNFQ8TB73 568 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 ENKURQ8TC29 256 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 TIMM29Q9BSF4 260 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 ANKHQ9HCJ1 492 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 C21orf62Q9NYP8 219 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 LRRC42Q9Y546 428 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 V9GYY9 64 aa3.21□□□□□ -1.9
PRKDC-208ENST00000536710 SLIT3O75094 1523 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 TRAV8-4A0A0B4J246 113 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 ZNF850A8MQ14 1090 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 SEC14L6B5MCN3 397 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 RFXANKO14593 260 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 PSPHP1O15172 72 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 GMDSO60547 372 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 WISP3O95389 354 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-208ENST00000536710 P01737 135 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 PRB2P02812 416 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-208ENST00000536710 CD74P04233 296 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 HTR2CP28335 458 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 ARR3P36575 388 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 PRLHRP49683 370 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 MTPNP58546 118 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 TAS2R60P59551 318 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 XIAPP98170 497 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 IFFO1Q0D2I5 559 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 MFSD14CQ5VZR4 134 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 H1FOOQ8IZA3 346 aaPredicted RBP3.2□□□□□ -1.9
PRKDC-208ENST00000536710 SLC7A5P1Q8MH63 180 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 ZNF709Q8N972 641 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 CYB561A3Q8NBI2 242 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 FAM19A4Q96LR4 140 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 TSNAXQ99598 290 aaKnown RBP3.2□□□□□ -1.9
PRKDC-208ENST00000536710 UTP23Q9BRU9 249 aaKnown RBP3.2□□□□□ -1.9
PRKDC-208ENST00000536710 OR51B5Q9H339 312 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 HEBP1Q9NRV9 189 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 STK38LQ9Y2H1 464 aa3.2□□□□□ -1.9
PRKDC-208ENST00000536710 AQRO60306 1485 aaKnown RBP eCLIP3.2□□□□□ -1.9
PRKDC-208ENST00000536710 CYB5R3P00387 301 aaPredicted RBP3.19□□□□□ -1.9
PRKDC-208ENST00000536710 ZNF286BP0CG31 522 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 PRKACBP22694 351 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 CXCR1P25024 350 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 RPL31P62899 125 aaKnown RBP3.19□□□□□ -1.9
PRKDC-208ENST00000536710 KDM4DQ6B0I6 523 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 C16orf87Q6PH81 154 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 TRIML2Q8N7C3 387 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 OR4M2Q8NGB6 313 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 OR1L1Q8NH94 360 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 CIDECQ96AQ7 238 aaPredicted RBP3.19□□□□□ -1.9
PRKDC-208ENST00000536710 LRRC39Q96DD0 335 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 ALS2CR12Q96Q35 445 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 NAPGQ99747 312 aaPredicted RBP3.19□□□□□ -1.9
PRKDC-208ENST00000536710 MAP1LC3CQ9BXW4 147 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 CHRNA10Q9GZZ6 450 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 XKR8Q9H6D3 395 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 HAUS4Q9H6D7 363 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 VCX3AQ9NNX9 186 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 CFL2Q9Y281 166 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 CBY1Q9Y3M2 126 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 PLA2R1Q13018 1463 aa3.19□□□□□ -1.9
PRKDC-208ENST00000536710 TRAV8-7A0A075B6U6 113 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 TRAV40A0A0B4J280 105 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 IGHV2OR16-5A0A0B4J2B6 119 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 GSTTP1A0A1W2PQM5 241 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 LRCOL1A6NCL2 159 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 COLCA2A8K830 154 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 RRP8O43159 456 aaKnown RBP3.18□□□□□ -1.9
PRKDC-208ENST00000536710 SPOPO43791 374 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 RPN2P04844 631 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 GNRHRP30968 328 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 ERFP50548 548 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 ATP5J2P56134 94 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 ZNF816Q0VGE8 651 aaPredicted RBP3.18□□□□□ -1.9
PRKDC-208ENST00000536710 GATSQ8NAP1 163 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 LRRC20Q8TCA0 184 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 CACNG8Q8WXS5 425 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 CPNE4Q96A23 557 aaPredicted RBP3.18□□□□□ -1.9
PRKDC-208ENST00000536710 MARVELD1Q9BSK0 173 aa3.18□□□□□ -1.9
PRKDC-208ENST00000536710 CHCHD7Q9BUK0 85 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms