RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TMEM178AQ8NBL3 297 aa6.98□□□□□ -1.29
COL21A1-212ENST00000535941 GJC3Q8NFK1 279 aa6.98□□□□□ -1.29
COL21A1-212ENST00000535941 ABHD3Q8WU67 409 aa6.98□□□□□ -1.29
COL21A1-212ENST00000535941 ROBO4Q8WZ75 1007 aa6.98□□□□□ -1.29
COL21A1-212ENST00000535941 ADAT3Q96EY9 351 aaPredicted RBP6.98□□□□□ -1.29
COL21A1-212ENST00000535941 C1QTNF5Q9BXJ0 243 aa6.98□□□□□ -1.29
COL21A1-212ENST00000535941 MIOXQ9UGB7 285 aa6.98□□□□□ -1.29
COL21A1-212ENST00000535941 TMEM269A0A1B0GVZ9 245 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 ZNF726A6NNF4 738 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 EIF3GO75821 320 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 ITGB2P05107 769 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 PRF1P14222 555 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 SLC6A1P30531 599 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 KCNJ3P48549 501 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 NOVA1P51513 510 aaKnown RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 PPIAP62937 165 aaKnown RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 NHLRC3Q5JS37 347 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 OLFML2AQ68BL7 652 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 C16orf54Q6UWD8 224 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 ASCL4Q6XD76 172 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 Q6ZS92 163 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 SLC22A24Q8N4F4 322 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 PAQR4Q8N4S7 273 aaPredicted RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 FGFBP3Q8TAT2 258 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 JSRP1Q96MG2 331 aaPredicted RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 SLC25A18Q9H1K4 315 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 NKIRAS2Q9NYR9 191 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 IKZF2Q9UKS7 526 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 A0A0A6YYH2 397 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 A6NJ64 397 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 DISC1C4P0D8 188 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 H2BFMP0C1H6 154 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 SMIM6P0DI80 62 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 AGTR1P30556 359 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 CX3CR1P49238 355 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 CCDC157Q569K6 752 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 LINC00696Q6ZRV3 163 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 SLC16A14Q7RTX9 510 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 TSNAXQ99598 290 aaKnown RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 CMSS1Q9BQ75 279 aaKnown RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 TAS2R4Q9NYW5 299 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 GPR160Q9UJ42 338 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 CELSR3Q9NYQ7 3312 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 IGKV1-9A0A0C4DH69 117 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 TMEM272A0A1B0GTI8 110 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 METTL21EPA6NDL7 271 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 RP2O75695 350 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 CNOT4O95628 575 aaKnown RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 FGF2P09038 288 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 ECH1Q13011 328 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 HFEQ30201 348 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 HSD17B13Q7Z5P4 300 aaPredicted RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 RFT1Q96AA3 541 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 TMEM68Q96MH6 324 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 OR2H1Q9GZK4 316 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 SLCO5A1Q9H2Y9 848 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 DLL4Q9NR61 685 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 MYEF2Q9P2K5 600 aaKnown RBP6.97□□□□□ -1.29
COL21A1-212ENST00000535941 EXTL2Q9UBQ6 330 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 ZNF391Q9UJN7 358 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 DHDHQ9UQ10 334 aa6.97□□□□□ -1.29
COL21A1-212ENST00000535941 TMEM14DPA8MWL7 114 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 XRCC3O43542 346 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 CTAG2O75638 210 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 HLA-DQA2P01906 255 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 SSBP1Q04837 148 aaKnown RBP6.96□□□□□ -1.29
COL21A1-212ENST00000535941 DYRK1AQ13627 763 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 RBMS2Q15434 407 aaKnown RBP6.96□□□□□ -1.29
COL21A1-212ENST00000535941 OR8B8Q15620 311 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 DOK3Q7L591 496 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 MEIOBQ8N635 442 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 ZNF676Q8N7Q3 588 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 SAMD12Q8N8I0 201 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 OR51A2Q8NGJ7 313 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 FOXRED1Q96CU9 486 aaPredicted RBP6.96□□□□□ -1.29
COL21A1-212ENST00000535941 SOX7Q9BT81 388 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 CRLF2Q9HC73 371 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 GLRX2Q9NS18 164 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 TAS2R3Q9NYW6 316 aa6.96□□□□□ -1.29
COL21A1-212ENST00000535941 A0A1B0GWJ7 208 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 ANXA2P2A6NMY6 339 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 EEF1E1O43324 174 aaKnown RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 S100A8P05109 93 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 MELTFP08582 738 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 ACAA1P09110 424 aaPredicted RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 TMEM11P17152 192 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 COX5AP20674 150 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 MPZP25189 248 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 OR3A2P47893 321 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 GSK3AP49840 483 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 MRPS10P82664 201 aaKnown RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 SLC10A1Q14973 349 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 RNASE12Q5GAN4 147 aaKnown RBP6.96□□□□□ -1.3
COL21A1-212ENST00000535941 TSPO2Q5TGU0 170 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 CARD17Q5XLA6 110 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 DRAM2Q6UX65 266 aa6.96□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF584Q8IVC4 421 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms