RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SOCS1O15524 211 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 CDC14BO60729 498 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 DHRS3O75911 302 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 MT-CO3P00414 261 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 HLA-AP01891 365 aaKnown RBP11.71□□□□□ -0.54
VPS33B-202ENST00000535906 FAHP16930 419 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 AGTR1P30556 359 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 ECH1Q13011 328 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 UBE2V2Q15819 145 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 SNAI3Q3KNW1 292 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF660Q6AZW8 331 aaPredicted RBP11.71□□□□□ -0.54
VPS33B-202ENST00000535906 ABLIM2Q6H8Q1 611 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 DHRS13Q6UX07 377 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 C17orf107Q6ZR85 190 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 AAED1Q7RTV5 226 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.71□□□□□ -0.54
VPS33B-202ENST00000535906 OR2W3Q7Z3T1 314 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 ZDHHC22Q8N966 263 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 OR5D18Q8NGL1 313 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 MRGPRFQ96AM1 343 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 GPR87Q9BY21 358 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 HES7Q9BYE0 225 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 KCNMB2Q9Y691 235 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 V9GYS6 101 aa11.71□□□□□ -0.54
VPS33B-202ENST00000535906 SSX5O60225 188 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 PATE4P0C8F1 98 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 ZBTB25P24278 435 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 AVPR2P30518 371 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 KISS1Q15726 138 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 PLAC9Q5JTB6 97 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 LIN54Q6MZP7 749 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 C1QL2Q7Z5L3 287 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF546Q86UE3 836 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 GPR137CQ8N3F9 429 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 KCNG3Q8TAE7 436 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 ABHD3Q8WU67 409 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 TMEM38BQ9NVV0 291 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
VPS33B-202ENST00000535906 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 NOP16Q9Y3C1 178 aaKnown RBP11.7□□□□□ -0.54
VPS33B-202ENST00000535906 MED13Q9UHV7 2174 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 OR5H14A6NHG9 310 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 SGCEO43556 437 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 B4GALT1P15291 398 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 ZP3P21754 424 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 CRYGSP22914 178 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 TMEM50BP56557 158 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 LYG2Q86SG7 212 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 OR5M9Q8NGP3 310 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 SPTSSAQ969W0 71 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 TMEM59Q9BXS4 323 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 IFT46Q9NQC8 304 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
VPS33B-202ENST00000535906 POM121CA8CG34 1229 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 C21orf140B9A014 251 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 SYNGR3O43761 229 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CRTAPO75718 401 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-202ENST00000535906 IL2RAP01589 272 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CHRM2P08172 466 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CELA3AP09093 270 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 PRF1P14222 555 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 HLA-GP17693 338 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 TBPP20226 339 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 HRH1P35367 487 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CASRP41180 1078 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 HGFACQ04756 655 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 BAMBIQ13145 260 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 DCAF10Q5QP82 559 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 ABHD17BQ5VST6 288 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 Q6ZSR3 168 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 OR2M7Q8NG81 312 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CPT1CQ8TCG5 803 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 ADAMTS17Q8TE56 1095 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 PFDN2Q9UHV9 154 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 BOKQ9UMX3 212 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-202ENST00000535906 SESN1Q9Y6P5 492 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 LOC100509620A0A075B734 347 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 A0A0D9SG52 128 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CST2P09228 141 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 MGMTP16455 207 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 THBS4P35443 961 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 PTGFRP43088 359 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 FAHD2BQ6P2I3 314 aaPredicted RBP11.69□□□□□ -0.54
VPS33B-202ENST00000535906 PLXDC2Q6UX71 529 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 OR2AE1Q8NHA4 323 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 FAHD2AQ96GK7 314 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 FAM173AQ9BQD7 235 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 C1QTNF6Q9BXI9 259 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CHST5Q9GZS9 411 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 CST11Q9H112 138 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 IL17BQ9UHF5 180 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
VPS33B-202ENST00000535906 STMND1H3BQB6 276 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 CYTIPO60759 359 aa11.68□□□□□ -0.54
VPS33B-202ENST00000535906 SPDEFO95238 335 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms