RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FAHD2BQ6P2I3 314 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 Q6ZT83 130 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 BHLHA15Q7RTS1 189 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 SH2D6Q7Z4S9 175 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 THOC6Q86W42 341 aaKnown RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 C9orf40Q8IXQ3 194 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF100Q8IYN0 542 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 UBQLNLQ8IYU4 475 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF786Q8N393 782 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 TCAIMQ8N3R3 496 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 RNF10Q8N5U6 811 aaKnown RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 UBL4BQ8N7F7 174 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 FADS6Q8N9I5 356 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ACOT4Q8N9L9 421 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 KLHL30-AS1Q8NEE0 82 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 OR4K14Q8NGD5 310 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 OR10A7Q8NGE5 316 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF671Q8TAW3 534 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 FAM110BQ8TC76 370 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ACTL9Q8TC94 416 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 DNAJA4Q8WW22 397 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 TRUB1Q8WWH5 349 aaKnown RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 THRSPQ92748 146 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 NEIL2Q969S2 332 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 CPNE4Q96A23 557 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 S100PBPQ96BU1 408 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 FAHD2AQ96GK7 314 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 C7orf34Q96L11 122 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 CCDC42Q96M95 316 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 COL21A1Q96P44 957 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 SERPINB12Q96P63 405 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 OR5B2Q96R09 309 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 EFCAB11Q9BUY7 163 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 KIFC1Q9BW19 673 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF717Q9BY31 904 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 EHD1Q9H4M9 534 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 CHRAC1Q9NRG0 131 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 LYARQ9NX58 379 aaKnown RBP2.45□□□□□ -2.02
SNHG1-202ENST00000535689 VNN3Q9NY84 501 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 AHSPQ9NZD4 102 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 EXTL2Q9UBQ6 330 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 FBXO5Q9UKT4 447 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF337Q9Y3M9 751 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 WDR45Q9Y484 360 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 OR10H1Q9Y4A9 318 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 N6AMT1Q9Y5N5 214 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 WIF1Q9Y5W5 379 aa2.45□□□□□ -2.02
SNHG1-202ENST00000535689 A0A0G2JMP0 313 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 A0A0X1KG70 313 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 A0A1B0GWJ7 208 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 FAM168BA1KXE4 195 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 LRRC30A6NM36 301 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 KLLNB2CW77 178 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 E7EQL1 145 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 TBX19O60806 448 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 NIPSNAP2O75323 286 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 LYPLA1O75608 230 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 STAMBPO95630 424 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 AK1P00568 194 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 LALBAP00709 142 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 MSMBP08118 114 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 H2BFMP0C1H6 154 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 BCL3P20749 454 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 IGHV1-2P23083 117 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 FKBP2P26885 142 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 RBMXP38159 391 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 EIF1P41567 113 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 ACAA2P42765 397 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 SSR2P43308 183 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 RFX3P48380 749 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 PPOXP50336 477 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 RAP1GDS1P52306 607 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 RAB10P61026 200 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 LYZP61626 148 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 UBA52P62987 128 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 REEP5Q00765 189 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 HMGCS1Q01581 520 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 PLCXD2Q0VAA5 305 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 GUSBP1Q15486 140 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 STK11Q15831 433 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 TAF9Q16594 264 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 PAN3Q58A45 887 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 CDKL4Q5MAI5 379 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 CTSL3PQ5NE16 218 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 CPTPQ5TA50 214 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 RAET1LQ5VY80 246 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 SULT1C3Q6IMI6 304 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 CBLN3Q6UW01 205 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 CCBE1Q6UXH8 406 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 PAGE2Q7Z2X7 111 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 C16orf62Q7Z3J2 963 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 ABHD12BQ7Z5M8 362 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 PPP1R27Q86WC6 154 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 ZNF573Q86YE8 665 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 GABRG1Q8N1C3 465 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 GPR137CQ8N3F9 429 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 ZCCHC7Q8N3Z6 543 aaKnown RBP2.44□□□□□ -2.02
SNHG1-202ENST00000535689 SVOPLQ8N434 492 aa2.44□□□□□ -2.02
SNHG1-202ENST00000535689 C14orf178Q8N769 122 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms