RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PYDC1Q8WXC3 89 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ST8SIA4Q92187 359 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 NPIPB3Q92617 1050 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 MYDGFQ969H8 173 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 HAVCR1Q96D42 359 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 L3HYPDHQ96EM0 354 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC41A3Q96GZ6 507 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF479Q96JC4 524 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF607Q96SK3 696 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 CCL13Q99616 98 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF184Q99676 751 aaPredicted RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 CADM1Q9BY67 442 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 OR2H1Q9GZK4 316 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 Q9H521 79 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 DCLRE1BQ9H816 532 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 MTHFD2LQ9H903 347 aaPredicted RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 WDR76Q9H967 626 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 B3GAT2Q9NPZ5 323 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SAR1AQ9NR31 198 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 PAPOLBQ9NRJ5 636 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 CYSLTR2Q9NS75 346 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ATAD3AQ9NVI7 634 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 TAS2R5Q9NYW4 299 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 PTTG3PQ9NZH4 202 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ADA2Q9NZK5 511 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 ERVK-18Q9QC07 812 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 IL19Q9UHD0 177 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 FBXL3Q9UKT7 428 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 UGT2A1Q9Y4X1 527 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 DNAJC15Q9Y5T4 150 aa2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SIRT4Q9Y6E7 314 aaPredicted RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 SRRM2Q9UQ35 2752 aaKnown RBP2.36□□□□□ -2.03
CHMP4A-208ENST00000534106 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 TRAV36DV7A0A075B6V5 113 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 ELOVL7A1L3X0 281 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 E9PBE3 544 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CLIC1O00299 241 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 TSPAN4O14817 238 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PHYHO14832 338 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CASQ2O14958 399 aaPredicted RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 AZIN1O14977 448 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SYNGR1O43759 233 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 TPST1O60507 370 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 TPST2O60704 377 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 FARS2O95363 451 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CH25HO95992 272 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 IFNW1P05000 195 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 LIPFP07098 398 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 DBIP07108 87 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 LYNP07948 512 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SNRPAP09012 282 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 ADORA3P0DMS8 318 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 NR2F1P10589 423 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SELLP14151 372 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 HOXB9P17482 250 aaPredicted RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 KITLGP21583 273 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 RPS4Y1P22090 263 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 EEF1B2P24534 225 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 GCAP28676 217 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 LAP3P28838 519 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SERPINB5P36952 375 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 HPCAL1P37235 193 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CDKN2CP42773 168 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC1A6P48664 564 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 AQP4P55087 323 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 NME5P56597 212 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 IL5RAQ01344 420 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 FMODQ06828 376 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PUDPQ08623 228 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 MED21Q13503 144 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 ALKBH1Q13686 389 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 OR8B8Q15620 311 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 NPTX1Q15818 432 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CNPY1Q3B7I2 92 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CDONQ4KMG0 1287 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 C6orf136Q5SQH8 315 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM69AQ5T7M9 428 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 C11orf88Q6PI97 169 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 C16orf89Q6UX73 402 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 UNQ9370/PRO34162Q6UXP9 181 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 LHFPL4Q7Z7J7 247 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CENPVQ7Z7K6 275 aaPredicted RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SNX32Q86XE0 403 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 DEFB107AQ8IZN7 70 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 Q8N2B8 174 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 RNF148Q8N7C7 305 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SPERTQ8NA61 448 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 LY6G5BQ8NDX9 201 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 BHLHE23Q8NDY6 225 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 OR5T2Q8NGG2 359 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 OR51G2Q8NGK0 314 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 OR6X1Q8NH79 312 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC7A13Q8TCU3 470 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 GATAD1Q8WUU5 269 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PTP4A1Q93096 173 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 NABP1Q96AH0 204 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 MOAP1Q96BY2 351 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms