RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SLC17A1Q14916 467 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 TFAP2EQ6VUC0 442 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 GTPBP8Q8N3Z3 284 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 OR51A2Q8NGJ7 313 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 OR56B4Q8NH76 319 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 PCNPQ8WW12 178 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 DACT3Q96B18 629 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 MRPL48Q96GC5 212 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 HYLS1Q96M11 299 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CMTM3Q96MX0 182 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 SHARPINQ9H0F6 387 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 TXNIPQ9H3M7 391 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 C12orf49Q9H741 205 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 EMC7Q9NPA0 242 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 KLHL9Q9P2J3 617 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 GTF2A1LQ9UNN4 478 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 VDAC3Q9Y277 283 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 B3GALT5Q9Y2C3 310 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 COA3Q9Y2R0 106 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 MEIKINA0A087WXM9 373 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 DPRXA6NFQ7 191 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM212A6NML5 194 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ANXA2P2A6NMY6 339 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 A8MVM7 634 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 MS4A18H0YCH9 400 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 XKRYO14609 159 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 EFNA2O43921 213 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 PEX14O75381 377 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 OPN1LWP04000 364 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ANXA2P07355 339 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CALCBP10092 127 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 SLC25A16P16260 332 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ANOS1P23352 680 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 POLR2HP52434 150 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 RAC1P63000 192 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 BSPH1Q075Z2 132 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 MS4A18Q3C1V0 323 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 LGALSLQ3ZCW2 172 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 TEX30Q5JUR7 227 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 C1QTNF12Q5T7M4 302 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CYB5R2Q6BCY4 276 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CORO6Q6QEF8 472 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CLEC2AQ6UVW9 174 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 BAIAP2L2Q6UXY1 529 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 LINC00346Q8IVM7 164 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 OR52B4Q8NGK2 314 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 GPR148Q8TDV2 347 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF431Q8TF32 576 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 OIT3Q8WWZ8 545 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ZBTB8AQ96BR9 441 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 S100A16Q96FQ6 103 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 GAL3ST1Q99999 423 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ABHD6Q9BV23 337 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 METTL17Q9H7H0 456 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 MED29Q9NX70 200 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CISD1Q9NZ45 108 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 VSX1Q9NZR4 365 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 LRP12Q9Y561 859 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 A0A0J9YW62 118 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 CIB4A0PJX0 185 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 SSNA1O43805 119 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 KHDRBS3O75525 346 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 MPC2O95563 127 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 POU3F4P49335 361 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 P2RY6Q15077 328 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 RNPS1Q15287 305 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 TSC22D1Q15714 1073 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 CREB3L2Q70SY1 520 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 NLRC3Q7RTR2 1065 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 SSX8Q7RTT4 187 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 GRINAQ7Z429 371 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF679Q8IYX0 411 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 RNF128Q8TEB7 428 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 TSEN15Q8WW01 171 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 FCAMRQ8WWV6 532 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 CYYR1Q96J86 154 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 CITED4Q96RK1 184 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 GP6Q9HCN6 339 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 COPZ2Q9P299 210 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 MYEF2Q9P2K5 600 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 STEAP1Q9UHE8 339 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 SHISA9B4DS77 424 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 TNFSF11O14788 317 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 SRSF10O75494 262 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 MT-ATP6P00846 226 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 VSIG10L2P0DP72 767 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 IFNGR1P15260 489 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 ENPP1P22413 925 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 MAPK3P27361 379 aaPredicted RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 RAG2P55895 527 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 EIF2B1Q14232 305 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 C2orf68Q2NKX9 166 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 FAM166AQ6J272 317 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 FDX2Q6P4F2 183 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 BHLHA15Q7RTS1 189 aaPredicted RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 C7orf50Q9BRJ6 194 aaKnown RBP7.12□□□□□ -1.27
NEDD8-207ENST00000533242 EMC6Q9BV81 110 aa7.12□□□□□ -1.27
NEDD8-207ENST00000533242 CHIAQ9BZP6 476 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms