RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ZNF782Q6ZMW2 699 aaPredicted RBP6.52□□□□□ -1.37
CD44-232ENST00000531118 CFAP77Q6ZQR2 320 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 OVCH2Q7RTZ1 564 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 DPY19L4Q7Z388 723 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 MAVSQ7Z434 540 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 OSR2Q8N2R0 312 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 LNX2Q8N448 690 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 KLHL30-AS1Q8NEE0 82 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 TMEM185AQ8NFB2 350 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 GJC3Q8NFK1 279 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 OR1M1Q8NGA1 313 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 OR13C2Q8NGS9 318 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 OR8S1Q8NH09 359 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 ANGPTL6Q8NI99 470 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 TAMM41Q96BW9 452 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 Q96M85 177 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 CCDC140Q96MF4 163 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 ATF6BQ99941 703 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 WDR13Q9H1Z4 485 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 SYT4Q9H2B2 425 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 RERGLQ9H628 205 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 KCNK9Q9NPC2 374 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 HAO2Q9NYQ3 351 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 VAPAQ9P0L0 249 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 LGALS13Q9UHV8 139 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 CORO2BQ9UQ03 480 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 GMEB1Q9Y692 573 aa6.52□□□□□ -1.37
CD44-232ENST00000531118 TLDC2A0PJX2 215 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 M0QX08 132 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 M0R135 149 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 IMPA2O14732 288 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 SLC16A7O60669 478 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 LY86O95711 162 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 ARG1P05089 322 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 FRMD6-AS1P0C7T7 363 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 IFI30P13284 250 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 GPX2P18283 190 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 SLC6A1P30531 599 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 NAA10P41227 235 aaPredicted RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 VEGFCP49767 419 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 SLC25A1P53007 311 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 ERVFRD-1P60508 538 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 SSX2Q16385 188 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 GLYATL3Q5SZD4 288 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 WDR93Q6P2C0 686 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 PGM2L1Q6PCE3 622 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 C16orf82Q7Z2V1 217 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 FAM122BQ7Z309 247 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 PIGWQ7Z7B1 504 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 NAA40Q86UY6 237 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 LINC00346Q8IVM7 164 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 C11orf65Q8NCR3 313 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 OR51A7Q8NH64 312 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 BPIFA2Q96DR5 249 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 ZNF799Q96GE5 643 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 MED30Q96HR3 178 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 DUX3Q96PT4 197 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 ROPN1BQ9BZX4 212 aaPredicted RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 POLR2J2Q9GZM3 115 aaKnown RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 POLR2J3Q9H1A7 115 aaKnown RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 TLNRD1Q9H1K6 362 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 ROPN1Q9HAT0 212 aaPredicted RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 PNRC2Q9NPJ4 139 aaKnown RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 USE1Q9NZ43 259 aa6.51□□□□□ -1.37
CD44-232ENST00000531118 VSX1Q9NZR4 365 aaPredicted RBP6.51□□□□□ -1.37
CD44-232ENST00000531118 DNAH11Q96DT5 4516 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 PSMB11A5LHX3 300 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 SH2D7A6NKC9 451 aaPredicted RBP6.5□□□□□ -1.37
CD44-232ENST00000531118 TRPC5OSA6NMA1 111 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 NOTOA8MTQ0 251 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 CDIPTO14735 213 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 AHCYL1O43865 530 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 TIPRLO75663 272 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 CD14P08571 375 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 ACAA1P09110 424 aaPredicted RBP6.5□□□□□ -1.37
CD44-232ENST00000531118 PGA5P0DJD9 388 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 CCL3L1P16619 93 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 TNFRSF1BP20333 461 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 SLC9A3P48764 834 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 ENTPD1P49961 510 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 CRYBA2P53672 197 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 TPTEP56180 551 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 CYP51A1Q16850 503 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 RFX4Q33E94 735 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 ABCA11PQ4W5N1 156 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 ZNF626Q68DY1 528 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 SLC18B1Q6NT16 456 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 PATL1Q86TB9 770 aaKnown RBP6.5□□□□□ -1.37
CD44-232ENST00000531118 C11orf42Q8N5U0 333 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 FAM156AQ8NDB6 213 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 OR5M8Q8NGP6 311 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 OR10Z1Q8NGY1 313 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 PITX2Q99697 317 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 TM2D3Q9BRN9 247 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 NLKQ9UBE8 527 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 GRHPRQ9UBQ7 328 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 RIMS3Q9UJD0 308 aa6.5□□□□□ -1.37
CD44-232ENST00000531118 ZNF222Q9UK12 451 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms