RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 POLR2JP52435 117 aaKnown RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 HILS1P60008 231 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 PUDPQ08623 228 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 PMS2P3Q13401 168 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 MAD2L1BPQ15013 274 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 RGNQ15493 299 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 MS4A18Q3C1V0 323 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 GTDC1Q4AE62 458 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 IFI44LQ53G44 452 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 PHYHD1Q5SRE7 291 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 HHATQ5VTY9 493 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 ACSM5Q6NUN0 579 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 FAHD2BQ6P2I3 314 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 ULK3Q6PHR2 472 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 DHRS4L2Q6PKH6 230 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 LRP11Q86VZ4 500 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 CARM1Q86X55 608 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 COMMD2Q86X83 199 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 LRRC17Q8N6Y2 441 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 OR4M2Q8NGB6 313 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 VANGL1Q8TAA9 524 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 YIPF5Q969M3 257 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 RAB39BQ96DA2 213 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 FAHD2AQ96GK7 314 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 SLC41A3Q96GZ6 507 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 EMC6Q9BV81 110 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 SUCNR1Q9BXA5 334 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 MMP28Q9H239 520 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 WDR55Q9H6Y2 383 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 ZNF665Q9H7R5 613 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 TMEM27Q9HBJ8 222 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 Q9N2K0 584 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 DNAJC4Q9NNZ3 241 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 SDR39U1Q9NRG7 319 aaPredicted RBP4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 MED29Q9NX70 200 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 FZR1Q9UM11 496 aa4.24□□□□□ -1.73
AMBRA1-209ENST00000529963 LOC105371242A0A075B767 164 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 A0A0B4J2E0 115 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 A0A1B0GX12 115 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 A0A1W2PPI3 338 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 PRORSD1PA6NEY8 169 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 PRR23D1E9PI22 279 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 J3QLI3 93 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 PLPP3O14495 311 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 SNNO75324 88 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 RP2O75695 350 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 GLCEO94923 617 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 OR6A2O95222 327 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MPZL1O95297 269 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 FARS2O95363 451 aaKnown RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 HPRP00739 348 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MT-ATP6P00846 226 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 PTHP01270 115 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 BGLAPP02818 100 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 SERPINA5P05154 406 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 PRR23D2P0DMB1 279 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 OR8G3PP0DMU2 310 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 PPIBP23284 216 aaKnown RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 HTR2AP28223 471 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 CDX1P47902 265 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 NPBWR1P48145 328 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 AQP5P55064 265 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 BIDP55957 195 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 KLF3P57682 345 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 RGS8P57771 180 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 LMO4P61968 165 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 RBBP4Q09028 425 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 OR1Q1Q15612 314 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 NPTX1Q15818 432 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MOGQ16653 247 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 TBC1D28Q2M2D7 210 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 ALKBH6Q3KRA9 238 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 REEP3Q6NUK4 255 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 TMEM53Q6P2H8 277 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 DPPA2Q7Z7J5 298 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 CROCCP2Q86T23 111 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 RANBP3LQ86VV4 465 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 BPIFB2Q8N4F0 458 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MREGQ8N565 214 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 SLC30A7Q8NEW0 376 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 CCDC107Q8WV48 283 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 C11orf40Q8WZ69 217 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 GTF2H4Q92759 462 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MAL2Q969L2 176 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 TIMD4Q96H15 378 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 ZNF75AQ96N20 296 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 ZNF607Q96SK3 696 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 TMEM43Q9BTV4 400 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 C1orf198Q9H425 327 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 RNF121Q9H920 327 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MRPL39Q9NYK5 338 aaKnown RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 GLTPQ9NZD2 209 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 TAAR3PQ9P1P4 343 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 ACTR3BQ9P1U1 418 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 MYEF2Q9P2K5 600 aaKnown RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 GPR132Q9UNW8 380 aa4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 V9GYY5 206 aaPredicted RBP4.23□□□□□ -1.73
AMBRA1-209ENST00000529963 TRRAPQ9Y4A5 3859 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms