RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 FAM3AP98173 230 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 SEC23BQ15437 767 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 FAM185AQ8N0U4 392 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 LYG1Q8N1E2 194 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 OR5T2Q8NGG2 359 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 RP9Q8TA86 221 aaKnown RBP9.42□□□□□ -0.9
CMTM1-211ENST00000528484 MCUR1Q96AQ8 359 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 PHF21AQ96BD5 680 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 HIST1H2AAQ96QV6 131 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 MEGF9Q9H1U4 602 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 HEXA-AS1Q9H8Q6 139 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 ABCB10Q9NRK6 738 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 SNTG1Q9NSN8 517 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 ADA2Q9NZK5 511 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 MPC1Q9Y5U8 109 aa9.42□□□□□ -0.9
CMTM1-211ENST00000528484 NME4O00746 187 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 DIRAS1O95057 198 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 MPIG6BO95866 241 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 NCK1P16333 377 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 BLVRAP53004 296 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 ELF3P78545 371 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-211ENST00000528484 ZBTB37Q5TC79 503 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 ZNF788Q6ZQV5 615 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 WDR86Q86TI4 376 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 C11orf53Q8IXP5 236 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 TMEM185AQ8NFB2 350 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 RORBQ92753 470 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 SEH1LQ96EE3 360 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 DHRS1Q96LJ7 313 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 RAB3IPQ96QF0 476 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-211ENST00000528484 TLNRD1Q9H1K6 362 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 MMP28Q9H239 520 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 EFCAB1Q9HAE3 211 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
CMTM1-211ENST00000528484 NLKQ9UBE8 527 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 CD300AQ9UGN4 299 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 PITPNC1Q9UKF7 332 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 COMMD3-BMI1R4GMX3 469 aa9.41□□□□□ -0.9
CMTM1-211ENST00000528484 OR2AT4A6NND4 320 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-211ENST00000528484 ZNF593O00488 134 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-211ENST00000528484 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-211ENST00000528484 PF4V1P10720 104 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 SELLP14151 372 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 GLRA1P23415 457 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 GSK3AP49840 483 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 NUDT2P50583 147 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 BMXP51813 675 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 SF3A3Q12874 501 aaKnown RBP eCLIP9.4□□□□□ -0.9
CMTM1-211ENST00000528484 TSPAN31Q12999 210 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 DGUOKQ16854 277 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 FAM57BQ71RH2 274 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 TIGD4Q8IY51 512 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 OR51L1Q8NGJ5 315 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 OR6K6Q8NGW6 343 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 RPL3LQ92901 407 aaKnown RBP9.4□□□□□ -0.9
CMTM1-211ENST00000528484 PGAM5Q96HS1 289 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 GAFA1Q96PS6 74 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 CDCA4Q9BXL8 241 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 PRSS22Q9GZN4 317 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 RHBDD3Q9Y3P4 386 aa9.4□□□□□ -0.9
CMTM1-211ENST00000528484 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 hCG_38984A0A1B0GV85 526 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 AKR7A2O43488 359 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 IFNGP01579 166 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 PF4P02776 101 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 CD28P10747 220 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 COX4I1P13073 169 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 EIF2B1Q14232 305 aaKnown RBP9.39□□□□□ -0.91
CMTM1-211ENST00000528484 TEX30Q5JUR7 227 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 FOXB2Q5VYV0 432 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 GLYATQ6IB77 296 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-211ENST00000528484 ZDHHC23Q8IYP9 409 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 ANGPTL6Q8NI99 470 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 RPS4Y2Q8TD47 263 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 SGK3Q96BR1 496 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-211ENST00000528484 RNF170Q96K19 258 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 C7orf34Q96L11 122 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 OCSTAMPQ9BR26 566 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 WDR13Q9H1Z4 485 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 DCAF13Q9NV06 445 aaKnown RBP9.39□□□□□ -0.91
CMTM1-211ENST00000528484 DNAJC27Q9NZQ0 273 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 LRP12Q9Y561 859 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 CDH10Q9Y6N8 788 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 V9GYQ6 96 aa9.39□□□□□ -0.91
CMTM1-211ENST00000528484 COL7A1Q02388 2944 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 DHRS12A0PJE2 317 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 ZNF850A8MQ14 1090 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 SLC1A7O00341 560 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 CLIC3O95833 236 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 AMY2BP19961 511 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 GSSP48637 474 aa9.38□□□□□ -0.91
CMTM1-211ENST00000528484 ZNF121P58317 390 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms