RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CPOQ8IVL8 374 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 C11orf53Q8IXP5 236 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 GCSAMQ8N6F7 178 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 IQCF1Q8N6M8 205 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 ZSCAN4Q8NAM6 433 aaPredicted RBP8.7□□□□□ -1.02
CPSF1-203ENST00000527916 GATAD2BQ8WXI9 593 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 LRTOMTQ8WZ04 291 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 OTULINQ96BN8 352 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 REEP6Q96HR9 211 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 RASSF4Q9H2L5 321 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 DPAGT1Q9H3H5 408 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 NIPAL2Q9H841 368 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF319Q9P2F9 582 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 ERVK-18Q9QC07 812 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF391Q9UJN7 358 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 N6AMT1Q9Y5N5 214 aa8.7□□□□□ -1.02
CPSF1-203ENST00000527916 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 OOEPA6NGQ2 149 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 ACOD1A6NK06 481 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 P2RY10O00398 339 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 GSC2O15499 205 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 ENSAO43768 121 aaKnown RBP8.69□□□□□ -1.02
CPSF1-203ENST00000527916 GRPP07492 148 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 MUC1P15941 1255 aaPredicted RBP8.69□□□□□ -1.02
CPSF1-203ENST00000527916 ALOX5APP20292 161 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 SLC2A5P22732 501 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 GSK3AP49840 483 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 OR8B8Q15620 311 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 KLHL12Q53G59 568 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 RUSC1-AS1Q66K80 236 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 Q6ZTK2 550 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 FAM57BQ71RH2 274 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 HS3ST5Q8IZT8 346 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 GALNT4Q8N4A0 578 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 OR8S1Q8NH09 359 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 THEM6Q8WUY1 208 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 DMRTB1Q96MA1 342 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 AMELYQ99218 206 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 PCGF1Q9BSM1 259 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 YIPF3Q9GZM5 350 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 C16orf95Q9H693 158 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 ABCB9Q9NP78 766 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 ACOXLQ9NUZ1 547 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 C1orf123Q9NWV4 160 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 CTSZQ9UBR2 303 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 MPC1Q9Y5U8 109 aa8.69□□□□□ -1.02
CPSF1-203ENST00000527916 A6NLC8 198 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 SELENOFO60613 162 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 ECDO95905 644 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 CST4P01036 141 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 DCTDP32321 178 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 GNALP38405 381 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 NAA10P41227 235 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 CRISP1P54107 249 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 ESRRGP62508 458 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 IL5RAQ01344 420 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 BNIP1Q12981 228 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 FAM76BQ5HYJ3 339 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 SFRP4Q6FHJ7 346 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 DHRS7BQ6IAN0 325 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 FAHD1Q6P587 224 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 Q6ZSV7 163 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF826PQ6ZT77 177 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 WDR86Q86TI4 376 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 FAM90A1Q86YD7 464 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 C19orf18Q8NEA5 215 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 OR1M1Q8NGA1 313 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 SGCDQ92629 289 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 C12orf43Q96C57 262 aaKnown RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 PGAM5Q96HS1 289 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 TEAD3Q99594 435 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 TLNRD1Q9H1K6 362 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 MMADHCQ9H3L0 296 aaPredicted RBP8.68□□□□□ -1.02
CPSF1-203ENST00000527916 NECAP2Q9NVZ3 263 aa8.68□□□□□ -1.02
CPSF1-203ENST00000527916 BTBD17A6NE02 478 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 TMEM210A6NLX4 147 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ANXA2P2A6NMY6 339 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF879B4DU55 563 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 C22orf46C9J442 243 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 GPR37O15354 613 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ADAM20O43506 726 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 XPNPEP2O43895 674 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF254O75437 659 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 TOX4O94842 621 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 IER3P46695 156 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 RASSF2P50749 326 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 DAPP51397 102 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 PSMA6P60900 246 aaKnown RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 EFNB1P98172 346 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ROM1Q03395 351 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 EGR3Q06889 387 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 PTGES3Q15185 160 aaKnown RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 SNAPC1Q16533 368 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 MICBQ29980 383 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ATPAF1Q5TC12 328 aaPredicted RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 TMEM236Q5W0B7 351 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms