RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 LIPNQ5VXI9 398 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 TTC23Q5W5X9 447 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 PLCXD3Q63HM9 321 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 LPCAT4Q643R3 524 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 ZNF826PQ6ZT77 177 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 SSX6Q7RTT6 188 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 ELMOD2Q8IZ81 293 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 ACBD7Q8N6N7 88 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 OR1M1Q8NGA1 313 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 RHOXF1Q8NHV9 184 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 ITPKCQ96DU7 683 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-209ENST00000527469 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 AASSQ9UDR5 926 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 LRCH1Q9Y2L9 728 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
CAPN1-209ENST00000527469 WNK2Q9Y3S1 2297 aa11.23□□□□□ -0.61
CAPN1-209ENST00000527469 J3QLI3 93 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 LGALS8O00214 317 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 TTRP02766 147 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 FAHP16930 419 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 PITPNBP48739 271 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 GPM6AP51674 278 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 GNB2P62879 340 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 CEP78Q5JTW2 689 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 ZNF684Q5T5D7 378 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 ZBTB37Q5TC79 503 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 SFRP4Q6FHJ7 346 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-209ENST00000527469 DCDC5Q6ZRR9 648 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 MOB3CQ70IA8 216 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 DOK3Q7L591 496 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 KCTD20Q7Z5Y7 419 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 SETD9Q8NE22 299 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 C19orf18Q8NEA5 215 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 PPP1R14AQ96A00 147 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 LGALS12Q96DT0 336 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-209ENST00000527469 DCLRE1BQ9H816 532 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 RNPEPL1Q9HAU8 725 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 AMBNQ9NP70 447 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 G6PC2Q9NQR9 355 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 ACOXLQ9NUZ1 547 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 CLN8Q9UBY8 286 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 SLC22A13Q9Y226 551 aa11.22□□□□□ -0.61
CAPN1-209ENST00000527469 OOEPA6NGQ2 149 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 OR5B21A6NL26 309 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 J3QLW9 94 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 CDIPTO14735 213 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 PHF1O43189 567 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-209ENST00000527469 SYT7O43581 403 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 NDUFA2O43678 99 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 SRSF10O75494 262 aaKnown RBP11.21□□□□□ -0.61
CAPN1-209ENST00000527469 FSTL3O95633 263 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 NRASP01111 189 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.61
CAPN1-209ENST00000527469 DBTP11182 482 aaKnown RBP11.21□□□□□ -0.61
CAPN1-209ENST00000527469 ZNF19P17023 458 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 PSMB10P40306 273 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 GMFBP60983 142 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 CSNK2BP67870 215 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 ZNF85Q03923 595 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 ZNF154Q13106 437 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 MICBQ29980 383 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 KRTAP21-3Q3LHN1 58 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 KLHL22Q53GT1 634 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 CLVS2Q5SYC1 327 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 CATSPERDQ86XM0 798 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 DHRSXQ8N5I4 330 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 RORBQ92753 470 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 TECTBQ96PL2 329 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 C7orf69Q9H7B7 122 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 PPP1R3EQ9H7J1 279 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 ERVK-18Q9QC07 812 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 DNAJB11Q9UBS4 358 aa11.21□□□□□ -0.61
CAPN1-209ENST00000527469 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF732B4DXR9 585 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 E9PQ18 207 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 F5H0A9 414 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-209ENST00000527469 H0YHG0 523 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 H3BSH0 61 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 ADAM20O43506 726 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 HTR1AP08908 422 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 WNT2P09544 360 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 ZNF12P17014 697 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 GABRB1P18505 474 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
CAPN1-209ENST00000527469 THBS2P35442 1172 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 SEC61A1P61619 476 aaKnown RBP11.2□□□□□ -0.62
CAPN1-209ENST00000527469 GNG3P63215 75 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 RAB40BQ12829 278 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 CEACAM21Q3KPI0 293 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 WDR82Q6UXN9 313 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 WDR86Q86TI4 376 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 CCDC54Q8NEL0 328 aa11.2□□□□□ -0.62
CAPN1-209ENST00000527469 RPL3LQ92901 407 aaKnown RBP11.2□□□□□ -0.62
CAPN1-209ENST00000527469 MRI1Q9BV20 369 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms