RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 URGCP-MRPS24S4R325 110 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ANK1P16157 1881 aa5.17□□□□□ -1.58
CD44-225ENST00000527326 ZNF106Q9H2Y7 1883 aaKnown RBP5.17□□□□□ -1.58
CD44-225ENST00000527326 ADAMTSL1Q8N6G6 1762 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 DNAJC25-GNG10A0A024R161 153 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 IGHV1-69-2A0A0G2JMI3 117 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 C13orf42A0A1B0GVH6 325 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 RBFOX3A6NFN3 312 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR5B21A6NL26 309 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 AQP7P3A6NL99 342 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 H3BS24 57 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 J3QLW9 94 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 PIRO00625 290 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CCL22O00626 93 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 NME2P1O60361 137 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CD3DP04234 171 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 AMY2AP04746 511 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CSN2P05814 226 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CKMP06732 381 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SRP19P09132 144 aaKnown RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 CXCL8P10145 99 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 KCNE1P15382 129 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 FAHP16930 419 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ZNF19P17023 458 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CFPP27918 469 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ADORA2BP29275 332 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ACVR1BP36896 505 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 VIPR2P41587 438 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ARRB1P49407 418 aaPredicted RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 HNRNPA3P51991 378 aaKnown RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 LBX1P52954 281 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SLC25A1P53007 311 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 TRA2BP62995 288 aaKnown RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 PAFAH1B2P68402 229 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 PITX1P78337 314 aaPredicted RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 ZXDBP98169 803 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 LTBQ06643 244 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ACSM2AQ08AH3 577 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ADIGQ0VDE8 80 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 HYAL1Q12794 435 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 TUSC3Q13454 348 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 PPP1R1AQ13522 171 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ODF1Q14990 250 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ELOCQ15369 112 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CEBPEQ15744 281 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 VAMP3Q15836 100 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ZXDCQ2QGD7 858 aaPredicted RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 FRG2Q64ET8 278 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ACSM2BQ68CK6 577 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 TOMM20LQ6UXN7 152 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 GLT6D1Q7Z4J2 308 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ABHD12BQ7Z5M8 362 aaPredicted RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 NIT1Q86X76 327 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ZNF280BQ86YH2 543 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CPOQ8IVL8 374 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SCN4BQ8IWT1 228 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 DND1Q8IYX4 353 aaKnown RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 STPG4Q8N801 248 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR2T33Q8NG76 320 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 GPR32P1Q8NGA4 272 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR10H4Q8NGA5 316 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR52L2PQ8NGH6 319 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR5B3Q8NH48 314 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR5K2Q8NHB8 316 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 ZNF596Q8TC21 504 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CYB5D2Q8WUJ1 264 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 TMEM239Q8WW34 195 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 DYRK2Q92630 601 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 TMEM186Q96B77 213 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 HHIPL1Q96JK4 782 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SLC41A2Q96JW4 573 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 FOXN4Q96NZ1 517 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 MS4A10Q96PG2 267 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 FRG2BQ96QU4 278 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR2V2Q96R30 315 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 MYADMQ96S97 322 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CABLES2Q9BTV7 478 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SLC12A9Q9BXP2 914 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 EBPLQ9BY08 206 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SLC46A2Q9BY10 475 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SLC39A8Q9C0K1 460 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 MEGF9Q9H1U4 602 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 TMEM9BQ9NQ34 198 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 OR6C3Q9NZP0 311 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 KIAA1456Q9P272 454 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 CLN8Q9UBY8 286 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 FBXO4Q9UKT5 387 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SH2B3Q9UQQ2 575 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 SIGLEC7Q9Y286 467 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 MRPS16Q9Y3D3 137 aaKnown RBP5.16□□□□□ -1.58
CD44-225ENST00000527326 WIPI2Q9Y4P8 454 aa5.16□□□□□ -1.58
CD44-225ENST00000527326 KIAA1217Q5T5P2 1943 aa5.15□□□□□ -1.58
CD44-225ENST00000527326 BLACEA4D250 179 aa5.15□□□□□ -1.59
CD44-225ENST00000527326 MSGN1A6NI15 193 aa5.15□□□□□ -1.59
CD44-225ENST00000527326 OR4C45A6NMZ5 311 aa5.15□□□□□ -1.59
CD44-225ENST00000527326 ZNF736B4DX44 427 aaPredicted RBP5.15□□□□□ -1.59
CD44-225ENST00000527326 ALG1L2C9J202 215 aa5.15□□□□□ -1.59
CD44-225ENST00000527326 H0YIZ8 118 aa5.15□□□□□ -1.59
CD44-225ENST00000527326 SOCS6O14544 535 aa5.15□□□□□ -1.59
CD44-225ENST00000527326 SLC16A5O15375 505 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms