RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 MARCH5Q9NX47 278 aa12.38□□□□□ -0.43
LRRK1-202ENST00000525284 DHRS7CA6NNS2 312 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF324O75467 553 aaPredicted RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 HIST1H1CP16403 213 aaKnown RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SLC25A26Q70HW3 274 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ABI3BPQ7Z7G0 1075 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF683Q8IZ20 524 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ATOH8Q96SQ7 321 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SLC45A2Q9UMX9 530 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SPEF2Q9C093 1822 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 DUXBA0A1W2PPF3 345 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 TMEM218A2RU14 115 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ANKRD34CP0C6C1 535 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SLC37A1P57057 533 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 VN1R17PQ8TDU5 208 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 TM4SF18Q96CE8 201 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 TXLNGYQ9BZA5 131 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 GEMIN2O14893 280 aaKnown RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 KLF7O75840 302 aaPredicted RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 LYZL6O75951 148 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 OTUD1Q5VV17 481 aaPredicted RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 OR5AU1Q8NGC0 362 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF502Q8TBZ5 544 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 EDARADDQ8WWZ3 215 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SLC35B3Q9H1N7 401 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 HCFC1R1Q9NWW0 138 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 OR6C3Q9NZP0 311 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ZNF346Q9UL40 294 aaKnown RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SP1P08047 785 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 CD96P40200 585 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 KCND3Q9UK17 655 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 GAGE10A6NGK3 116 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ORM2P19652 201 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 CXCL12P48061 93 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 GUCA2AQ02747 115 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 HNRNPA1L2Q32P51 320 aaKnown RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 DOLPP1Q86YN1 238 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 D2HGDHQ8N465 521 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ARFGAP1Q8N6T3 406 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 ADAT3Q96EY9 351 aaPredicted RBP12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SNX22Q96L94 193 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 SPOCK3Q9BQ16 436 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 AUP1Q9Y679 476 aa12.37□□□□□ -0.43
LRRK1-202ENST00000525284 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ARR3P36575 388 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 LYZP61626 148 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 AESQ08117 197 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 SLC38A11Q08AI6 406 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 CLN3Q13286 438 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 OR2I1PQ8NGU4 316 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 TMEM56Q96MV1 263 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 TECRQ9NZ01 308 aaKnown RBP12.36□□□□□ -0.43
LRRK1-202ENST00000525284 A0A1B0GTW7 788 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 CTSAP10619 480 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 CEBPBP17676 345 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 OR10J1P30954 320 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
LRRK1-202ENST00000525284 KIR2DL2P43627 348 aaPredicted RBP12.36□□□□□ -0.43
LRRK1-202ENST00000525284 LMO3Q8TAP4 145 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 WBP2Q969T9 261 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 KCNK15Q9H427 330 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 IGKV6D-41A0A0C4DH26 115 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 TMEM129A0AVI4 362 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ACTL6AO96019 429 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ARG1P05089 322 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 JUNBP17275 347 aaPredicted RBP12.36□□□□□ -0.43
LRRK1-202ENST00000525284 RPS27P42677 84 aaKnown RBP12.36□□□□□ -0.43
LRRK1-202ENST00000525284 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ORAI1Q96D31 301 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 KLK11Q9UBX7 282 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ZMIZ1Q9ULJ6 1067 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ALOX12BO75342 701 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 CRYAAP02489 173 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 IL10RAQ13651 578 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 OR6S1Q8NH40 331 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 NEURL3Q96EH8 262 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 SARGQ9BW04 601 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 CACFD1Q9UGQ2 172 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
LRRK1-202ENST00000525284 TRGV10A0A0A0MS01 117 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 MBTPS2O43462 519 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 C1SP09871 688 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 SFTPA2Q8IWL1 248 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 SFTPA1Q8IWL2 248 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 RSG1Q9BU20 258 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
LRRK1-202ENST00000525284 IGHV3-15A0A0B4J1V0 119 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 A0A1W2PNR3 127 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 DEFB108AA8MXU0 73 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 HRASP01112 189 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 COX6CP09669 75 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 OR2W3Q7Z3T1 314 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 VRK3Q8IV63 474 aa12.35□□□□□ -0.43
LRRK1-202ENST00000525284 OSR2Q8N2R0 312 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms