RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 OR4M2Q8NGB6 313 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 OR2T29Q8NH02 315 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 ITFG1Q8TB96 612 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 ZBED3Q96IU2 234 aaPredicted RBP1.9□□□□□ -2.11
CD44-215ENST00000525241 C9orf72Q96LT7 481 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 DAZ1Q9NQZ3 744 aaKnown RBP1.9□□□□□ -2.11
CD44-215ENST00000525241 MCUBQ9NWR8 336 aa1.9□□□□□ -2.11
CD44-215ENST00000525241 A0A1W2PRD5 423 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 C4orf51C9J302 202 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 CLDN34H7C241 214 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 WRBO00258 174 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 CCDC22O60826 627 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 KLHL2O95198 593 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 IGKV1-39P01597 117 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 MAS1P04201 325 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 IGKV1D-39P04432 117 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 MMP7P09237 267 aaPredicted RBP1.89□□□□□ -2.11
CD44-215ENST00000525241 THRAP10827 490 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 HRES1P13985 223 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 CXCR1P25024 350 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 IL3RAP26951 378 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 RPS5P46782 204 aaKnown RBP1.89□□□□□ -2.11
CD44-215ENST00000525241 PPP1CAP62136 330 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 STEAP4Q687X5 459 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 FAM122BQ7Z309 247 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 LRRC75AQ8NAA5 344 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 SCGB3A2Q96PL1 93 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 MYCBPQ99417 103 aaPredicted RBP1.89□□□□□ -2.11
CD44-215ENST00000525241 CD209Q9NNX6 404 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 FBXO8Q9NRD0 319 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 HEBP1Q9NRV9 189 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 CA10Q9NS85 328 aa1.89□□□□□ -2.11
CD44-215ENST00000525241 SDK2Q58EX2 2172 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 TRAV25A0A0B4J276 109 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 SERTM2A0A1B0GWG4 89 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 LRRIQ4A6NIV6 560 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 LINC01619G3V211 115 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 CTAG2O75638 210 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 SCELO95171 688 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 ZNF35P13682 527 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 TGM4P49221 684 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 CLDN18P56856 261 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 INCA1Q0VD86 236 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 ZNF678Q5SXM1 525 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 ZFAND6Q6FIF0 208 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 MORN3Q6PF18 240 aaPredicted RBP1.88□□□□□ -2.11
CD44-215ENST00000525241 BBS7Q8IWZ6 715 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 MICU2Q8IYU8 434 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 LINC00469Q8N7U9 141 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 RXFP2Q8WXD0 754 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 APH1AQ96BI3 265 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 RCN3Q96D15 328 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 RDH12Q96NR8 316 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 ALS2CR12Q96Q35 445 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 PDCD1LG2Q9BQ51 273 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 MS4A8Q9BY19 250 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 REEP1Q9H902 201 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 ZNF492Q9P255 531 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 HMGXB4Q9UGU5 601 aa1.88□□□□□ -2.11
CD44-215ENST00000525241 TRIP11Q15643 1979 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 LOC102724200A0A096LPH7 203 aaPredicted RBP1.87□□□□□ -2.11
CD44-215ENST00000525241 A0A0B4J2E0 115 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 PTHP01270 115 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 CATP04040 527 aaKnown RBP1.87□□□□□ -2.11
CD44-215ENST00000525241 GALP22466 123 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 MPIP34949 423 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 GPR1P46091 355 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 IL18Q14116 193 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 IHHQ14623 411 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 HCP5Q6MZN7 132 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 FAM131AQ6UXB0 335 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 SLC30A8Q8IWU4 369 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 CA5BP1Q8WTZ4 195 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 TMEM159Q96B96 161 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 SMARCD1Q96GM5 515 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 UBE2E2Q96LR5 201 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 DEFB129Q9H1M3 183 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 TAS2R1Q9NYW7 299 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 R4GN34 69 aa1.87□□□□□ -2.11
CD44-215ENST00000525241 ZNF608Q9ULD9 1512 aaPredicted RBP1.86□□□□□ -2.11
CD44-215ENST00000525241 FBN1P35555 2871 aaKnown RBP1.86□□□□□ -2.11
CD44-215ENST00000525241 SIVA1O15304 175 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 MPDU1O75352 247 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 IGHV1-46P01743 117 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 GFAPP14136 432 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 HLA-DMAP28067 261 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 C5orf64Q2M2E5 130 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 DEFB134Q4QY38 66 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 FAM104BQ5XKR9 115 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 KATNAL2Q8IYT4 538 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 CNPY4Q8N129 248 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 KIF2BQ8N4N8 673 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 SFXN5Q8TD22 340 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 SNF8Q96H20 258 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 MTG1Q9BT17 334 aaPredicted RBP1.86□□□□□ -2.11
CD44-215ENST00000525241 PLA2G12AQ9BZM1 189 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 NAA50Q9GZZ1 169 aaKnown RBP1.86□□□□□ -2.11
CD44-215ENST00000525241 TRIM45Q9H8W5 580 aaPredicted RBP1.86□□□□□ -2.11
CD44-215ENST00000525241 FANCEQ9HB96 536 aa1.86□□□□□ -2.11
CD44-215ENST00000525241 AHSPQ9NZD4 102 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms