RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LRTOMTQ8WZ04 291 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 OR5P3Q8WZ94 311 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 ST8SIA4Q92187 359 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 RPL3LQ92901 407 aaKnown RBP15.4■□□□□ 0.06
CAPN1-203ENST00000525013 RNF170Q96K19 258 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 IL4I1Q96RQ9 567 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 CCL13Q99616 98 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 COPS3Q9UNS2 423 aa15.4■□□□□ 0.06
CAPN1-203ENST00000525013 ACOD1A6NK06 481 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 ZAR1LA6NP61 321 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 ZNF254O75437 659 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 PLATP00750 562 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 LIPFP07098 398 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 MAP2K3P46734 347 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 COMPP49747 757 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-203ENST00000525013 RIDAP52758 137 aaKnown RBP15.39■□□□□ 0.05
CAPN1-203ENST00000525013 TUSC1Q2TAM9 212 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 GPR157Q5UAW9 335 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 BRD3OSQ6XYD6 125 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 BTN2A1Q7KYR7 527 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 ZDHHC23Q8IYP9 409 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 ZNF679Q8IYX0 411 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 TMEM163Q8TC26 289 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 SEH1LQ96EE3 360 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 FAM71F1Q96KD3 344 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-203ENST00000525013 OR8B4Q96RC9 309 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 PBOV1Q9GZY1 135 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 TLNRD1Q9H1K6 362 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 FAM206AQ9NX38 181 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 ENOPH1Q9UHY7 261 aa15.39■□□□□ 0.05
CAPN1-203ENST00000525013 A0A0U1RQV5 110 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ZNF816-ZNF321PA0A0X1KG74 233 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 SLC22A31A6NKX4 558 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 TMEM210A6NLX4 147 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 PRR32B1ATL7 298 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ZNF879B4DU55 563 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-203ENST00000525013 TOX4O94842 621 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 SFTPBP07988 381 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 CFHR2P36980 270 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ELF3P78545 371 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ROM1Q03395 351 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ZNF829Q3KNS6 432 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-203ENST00000525013 WDR38Q5JTN6 314 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 METTL11BQ5VVY1 283 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 C12orf73Q69YU5 71 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 ZNF322Q6U7Q0 402 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-203ENST00000525013 C9orf139Q6ZV77 190 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 SLC36A1Q7Z2H8 476 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 THAP5Q7Z6K1 395 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 SCCPDHQ8NBX0 429 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 OR5T2Q8NGG2 359 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 OR51E1Q8TCB6 317 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 CIB1Q99828 191 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 APOL4Q9BPW4 351 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 GABARAPL1Q9H0R8 117 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 SEMA6AQ9H2E6 1030 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 GPR84Q9NQS5 396 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 KAAG1Q9UBP8 84 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 DNAJB11Q9UBS4 358 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 GTF2A1LQ9UNN4 478 aa15.38■□□□□ 0.05
CAPN1-203ENST00000525013 A0A1B0GW55 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 SRRM5B3KS81 715 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 ECDO95905 644 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L2P0CJ85 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L3P0CJ86 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L4P0CJ87 422 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L5P0CJ88 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L6P0CJ89 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L7P0CJ90 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DCTDP32321 178 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 GPM6AP51674 278 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 CXCR4P61073 352 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 CEP78Q5JTW2 689 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 AADACL4Q5VUY2 407 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 NXNL2Q5VZ03 156 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4L9Q6RFH8 374 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-203ENST00000525013 SLC35F2Q8IXU6 374 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 FAM216BQ8N7L0 139 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 OR10Z1Q8NGY1 313 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 HPSE2Q8WWQ2 592 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 ZDHHC16Q969W1 377 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 PPP1R14AQ96A00 147 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 SLC25A28Q96A46 364 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUS3LQ96G46 650 aaKnown RBP15.37■□□□□ 0.05
CAPN1-203ENST00000525013 C1orf147Q96MC9 270 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-203ENST00000525013 WDR13Q9H1Z4 485 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 ZMAT3Q9HA38 289 aaKnown RBP15.37■□□□□ 0.05
CAPN1-203ENST00000525013 SNTG1Q9NSN8 517 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 HAO2Q9NYQ3 351 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 DUX4Q9UBX2 424 aa15.37■□□□□ 0.05
CAPN1-203ENST00000525013 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 P2RY10O00398 339 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 MAGEB4O15481 346 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-203ENST00000525013 AKR7A2O43488 359 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 FCN3O75636 299 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 ACTR3P61158 418 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 ARF6P62330 175 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 EFNB1P98172 346 aa15.36■□□□□ 0.05
CAPN1-203ENST00000525013 MFGE8Q08431 387 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms