RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TEX12Q9BXU0 123 aa10.24□□□□□ -0.77
VEGFA-223ENST00000523125 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
VEGFA-223ENST00000523125 ZMAT3Q9HA38 289 aaKnown RBP10.24□□□□□ -0.77
VEGFA-223ENST00000523125 FAM206AQ9NX38 181 aa10.24□□□□□ -0.77
VEGFA-223ENST00000523125 KIF17Q9P2E2 1029 aa10.24□□□□□ -0.77
VEGFA-223ENST00000523125 COPS3Q9UNS2 423 aa10.24□□□□□ -0.77
VEGFA-223ENST00000523125 A0A0U1RQV5 110 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 ACOD1A6NK06 481 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 SRRM5B3KS81 715 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 G3V2T6 193 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 TMPRSS2O15393 492 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 SRSF10O75494 262 aaKnown RBP10.23□□□□□ -0.77
VEGFA-223ENST00000523125 TOX4O94842 621 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 IGLV3-1P01715 115 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 MTNR1AP48039 350 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 TGM4P49221 684 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 SNCBQ16143 134 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 MICBQ29980 383 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 DEFB112Q30KQ8 113 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 C11orf91Q3C1V1 193 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 WDR38Q5JTN6 314 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 KDM4DQ6B0I6 523 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 BTN2A1Q7KYR7 527 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 FTMTQ8N4E7 242 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 PNLDC1Q8NA58 520 aaKnown RBP10.23□□□□□ -0.77
VEGFA-223ENST00000523125 SCCPDHQ8NBX0 429 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 PIGCQ92535 297 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 RPL3LQ92901 407 aaKnown RBP10.23□□□□□ -0.77
VEGFA-223ENST00000523125 PPP1R14AQ96A00 147 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 DUS3LQ96G46 650 aaKnown RBP10.23□□□□□ -0.77
VEGFA-223ENST00000523125 WDFY2Q96P53 400 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 CCL13Q99616 98 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 MICU1Q9BPX6 476 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 RTL8AQ9BWD3 113 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 WDR13Q9H1Z4 485 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
VEGFA-223ENST00000523125 ZNF391Q9UJN7 358 aa10.23□□□□□ -0.77
VEGFA-223ENST00000523125 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 TMEM269A0A1B0GVZ9 245 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 TMEM210A6NLX4 147 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ANXA2P2A6NMY6 339 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ZAR1LA6NP61 321 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 P2RY10O00398 339 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ZNF254O75437 659 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ECDO95905 644 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-223ENST00000523125 MAP2K3P46734 347 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 BPIFB3P59826 476 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ARF6P62330 175 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ATPAF1Q5TC12 328 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-223ENST00000523125 GPR157Q5UAW9 335 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 AADACL4Q5VUY2 407 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 SLX4IPQ5VYV7 408 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 STUMQ69YW2 141 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
VEGFA-223ENST00000523125 MEPCEQ7L2J0 689 aaKnown RBP10.22□□□□□ -0.77
VEGFA-223ENST00000523125 AMIGO2Q86SJ2 522 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ZNF679Q8IYX0 411 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 FAM216BQ8N7L0 139 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 TCEANCQ8N8B7 351 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 OR5T2Q8NGG2 359 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 OR10Z1Q8NGY1 313 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ST8SIA4Q92187 359 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 TAF15Q92804 592 aaKnown RBP eCLIP10.22□□□□□ -0.77
VEGFA-223ENST00000523125 SLC25A28Q96A46 364 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 C12orf43Q96C57 262 aaKnown RBP10.22□□□□□ -0.77
VEGFA-223ENST00000523125 RNF170Q96K19 258 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 MROQ9BYG7 248 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 TTTY10Q9BZA0 68 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 PBOV1Q9GZY1 135 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 GABARAPL1Q9H0R8 117 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 ABCB9Q9NP78 766 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 KRT84Q9NSB2 600 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 HAO2Q9NYQ3 351 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 AP4S1Q9Y587 144 aa10.22□□□□□ -0.77
VEGFA-223ENST00000523125 MAGEB4O15481 346 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-223ENST00000523125 HOXA3O43365 443 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-223ENST00000523125 AKR7A2O43488 359 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 TTRP02766 147 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 TFF1P04155 84 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 SELLP14151 372 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 GPM6AP51674 278 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 MFGE8Q08431 387 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-223ENST00000523125 FOXL1Q12952 345 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 DMRTC1Q5HYR2 192 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 LCN1P1Q5VSP4 162 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 ZDHHC23Q8IYP9 409 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 TMEM163Q8TC26 289 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 OR51E1Q8TCB6 317 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 ASB17Q8WXJ9 295 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 LRTOMTQ8WZ04 291 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 ITFG2Q969R8 447 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 RAB3IPQ96QF0 476 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-223ENST00000523125 IL4I1Q96RQ9 567 aa10.21□□□□□ -0.77
VEGFA-223ENST00000523125 CNN2Q99439 309 aaKnown RBP10.21□□□□□ -0.77
VEGFA-223ENST00000523125 APOL4Q9BPW4 351 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms