RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PLK3Q9H4B4 646 aa14.53□□□□□ -0.08
USP42-207ENST00000521713 OSGIN2Q9Y236 505 aa14.53□□□□□ -0.08
USP42-207ENST00000521713 CROCCQ5TZA2 2017 aa14.53□□□□□ -0.08
USP42-207ENST00000521713 SPAARA0A1B0GVQ0 90 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 EPOPA6NHQ4 379 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 INSM1Q01101 510 aaPredicted RBP14.52□□□□□ -0.08
USP42-207ENST00000521713 ZNF141Q15928 474 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 RGS7BPQ6MZT1 257 aaPredicted RBP14.52□□□□□ -0.08
USP42-207ENST00000521713 SLC16A12Q6ZSM3 486 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 REEP6Q96HR9 211 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 ZNF354AO60765 605 aaPredicted RBP14.52□□□□□ -0.08
USP42-207ENST00000521713 FAM157BP0CG42 384 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 C11orf87Q6NUJ2 197 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 TFAP2EQ6VUC0 442 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 TMEM217Q8N7C4 229 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 GPR119Q8TDV5 335 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 PBOV1Q9GZY1 135 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 PLEKHF2Q9H8W4 249 aa14.52□□□□□ -0.08
USP42-207ENST00000521713 DNAJB12Q9NXW2 375 aaKnown RBP14.52□□□□□ -0.08
USP42-207ENST00000521713 B4E171 279 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 CSF2RBP32927 897 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 TSPAN7P41732 249 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 UCNP55089 124 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 DUSP18Q8NEJ0 188 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 TMEM231Q9H6L2 316 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 MED9Q9NWA0 146 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 SPAG17Q6Q759 2223 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 OR5H15A6NDH6 313 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 C1QAP02745 245 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 HABP2Q14520 560 aaPredicted RBP14.52□□□□□ -0.09
USP42-207ENST00000521713 IQCJQ1A5X6 159 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 BTLAQ7Z6A9 289 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 ZDHHC23Q8IYP9 409 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 OR4A16Q8NH70 328 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 WDR89Q96FK6 387 aaPredicted RBP14.52□□□□□ -0.09
USP42-207ENST00000521713 TMEFF2Q9UIK5 374 aaPredicted RBP14.52□□□□□ -0.09
USP42-207ENST00000521713 FLVCR2Q9UPI3 526 aa14.52□□□□□ -0.09
USP42-207ENST00000521713 RNASEK-C17orf49H0YIS7 233 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 EPXP11678 715 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 SIGLECL1Q8N7X8 197 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 TMEM229BQ8NBD8 167 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 PPP1R1CQ8WVI7 109 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 LYRM2Q9NU23 88 aaPredicted RBP14.51□□□□□ -0.09
USP42-207ENST00000521713 IL20Q9NYY1 176 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 HMSDA8MTL9 139 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 APEHP13798 732 aaKnown RBP14.51□□□□□ -0.09
USP42-207ENST00000521713 GLRA1P23415 457 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 SUMO1P63165 101 aaKnown RBP14.51□□□□□ -0.09
USP42-207ENST00000521713 ZNF85Q03923 595 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 WDR54Q9H977 334 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 XRCC3O43542 346 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 TUSC2O75896 110 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 CYC1P08574 325 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 MGST1P10620 155 aaKnown RBP14.51□□□□□ -0.09
USP42-207ENST00000521713 PJVKQ0ZLH3 352 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 MRM1Q6IN84 353 aaKnown RBP14.51□□□□□ -0.09
USP42-207ENST00000521713 POMT1Q9Y6A1 747 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 PHOX2AO14813 284 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 ARPC3O15145 178 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 GABRA1P14867 456 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 NQO2P16083 231 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 OR5AP2Q8NGF4 316 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 OR6S1Q8NH40 331 aa14.51□□□□□ -0.09
USP42-207ENST00000521713 FER1L6Q2WGJ9 1857 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 NDUFB6O95139 128 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 FCARP24071 287 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 STPG1Q5TH74 334 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 LHFPL5Q8TAF8 219 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 TECTBQ96PL2 329 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 BANF2Q9H503 90 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 ATAD5Q96QE3 1844 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 FITM1A5D6W6 292 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 SLC25A1P53007 311 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 UBE2MP61081 183 aaKnown RBP14.5□□□□□ -0.09
USP42-207ENST00000521713 FZD5Q13467 585 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 C12orf73Q69YU5 71 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 SLC6A13Q9NSD5 602 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 SLCO1B1Q9Y6L6 691 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 RRASP10301 218 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 GSG1Q2KHT4 349 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 ZNF321PQ8N8H1 164 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 OR10J5Q8NHC4 309 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 ZMAT3Q9HA38 289 aaKnown RBP14.5□□□□□ -0.09
USP42-207ENST00000521713 ZNF816-ZNF321PA0A0X1KG74 233 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 EFSO43281 561 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 EML2O95834 649 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 SCAND1P57086 179 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 BPIFCQ8NFQ6 507 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 ST6GAL2Q96JF0 529 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 RASL10BQ96S79 203 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 DLL4Q9NR61 685 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 SLC17A5Q9NRA2 495 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 SIGLEC7Q9Y286 467 aa14.5□□□□□ -0.09
USP42-207ENST00000521713 LINC00862A6NCI5 91 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 SFTA3P0C7M3 94 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 ALOX5APP20292 161 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 KCNJ3P48549 501 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 AGFG1P52594 562 aaKnown RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 HLXQ14774 488 aaPredicted RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 VAMP3Q15836 100 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms