RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 SSTR1P30872 391 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TGFBR2P37173 567 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 AMTP48728 403 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ACTR3P61158 418 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CDK16Q00536 496 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 EMX1Q04741 257 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 BST1Q10588 318 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 DDX39BQ13838 428 aaKnown RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 QPRTQ15274 297 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CFAP157Q5JU67 520 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 IL23RQ5VWK5 629 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 STEAP4Q687X5 459 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CGB2Q6NT52 195 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 LRRN1Q6UXK5 716 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CASP12Q6UXS9 341 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ZYG11AQ6WRX3 759 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 LRRC74BQ6ZQY2 392 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CYS1Q717R9 158 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 COMMD6Q7Z4G1 85 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 RTN4RL2Q86UN3 420 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF679Q8IYX0 411 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 RNF113BQ8IZP6 322 aaKnown RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CENPLQ8N0S6 344 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 PDIK1LQ8N165 341 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 PRSS35Q8N3Z0 413 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM99Q8N816 258 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 NEXN-AS1Q8NBZ9 246 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 SDR9C7Q8NEX9 313 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR4F17Q8NGA8 305 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR56B2PQ8NGI1 322 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR13C2Q8NGS9 318 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 PYROXD1Q8WU10 500 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 C1orf54Q8WWF1 131 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 GEMIN6Q8WXD5 167 aaKnown RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CCL17Q92583 94 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 RAB1CQ92928 201 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 RFT1Q96AA3 541 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 LRRC39Q96DD0 335 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 AURKBQ96GD4 344 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TXNDC15Q96J42 360 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ALKBH3Q96Q83 286 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR5B2Q96R09 309 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR4F4Q96R69 305 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ATOH8Q96SQ7 321 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 NABP2Q9BQ15 211 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TBL1XR1Q9BZK7 514 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR11A1Q9GZK7 315 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 YIPF3Q9GZM5 350 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 IQCGQ9H095 443 aaKnown RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 NCOR1P1Q9H4R4 102 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 Q9H521 79 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 GORASP2Q9H8Y8 452 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CRLF2Q9HC73 371 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 C20orf96Q9NUD7 363 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 SMPD3Q9NY59 655 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 UBAP1Q9NZ09 502 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 EMC3Q9P0I2 261 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TAAR3PQ9P1P4 343 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 SLC17A7Q9P2U7 560 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF225Q9UK10 706 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 RNF11Q9Y3C5 154 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 A0A1B0GW55 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 hDV102S1A0JD36 115 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 NKX6-3A6NJ46 265 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 GJE1A6NN92 205 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 E9PI62 339 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 GPR171O14626 319 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ARPC1BO15143 372 aaKnown RBP3.01□□□□□ -1.93
VPS13B-208ENST00000521037 PFDN6O15212 129 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SLC22A2O15244 555 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SPRY3O43610 288 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 FCMRO60667 390 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ENTPD5O75356 428 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 BANF1O75531 89 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 NDUFB8O95169 186 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 KLHL2O95198 593 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 IGHV3-13P01766 116 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 HLA-HP01893 362 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SNRPAP09012 282 aaKnown RBP3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4L2P0CJ85 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4L3P0CJ86 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4L5P0CJ88 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4L6P0CJ89 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4L7P0CJ90 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 HTR2AP28223 471 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 GCAP28676 217 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 GABRA3P34903 492 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ARR3P36575 388 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 MAGEA8P43361 318 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 HSPA13P48723 471 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINB9P50453 376 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 P2RX1P51575 399 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DLX1P56177 255 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 TGFBR3Q03167 851 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 PDIA2Q13087 525 aaKnown RBP3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SKP2Q13309 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 NAB1Q13506 487 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 RCN1Q15293 331 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUSP5Q16690 384 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 PAGE2BQ5JRK9 111 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms