RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	STK11	Q15831	433 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	PNLIPRP3	Q17RR3	467 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	C4orf46	Q504U0	113 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	CD163	Q86VB7	1156 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	OR5D18	Q8NGL1	313 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	OR2AE1	Q8NHA4	323 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	NPRL2	Q8WTW4	380 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	SNAPC3	Q92966	411 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	TM2D1	Q9BX74	207 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	RNF122	Q9H9V4	155 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	BCO1	Q9HAY6	547 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	PARD6A	Q9NPB6	346 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	IFT46	Q9NQC8	304 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	ZNF391	Q9UJN7	358 aa		10.79	□□□□□ -0.68
SPIDR-210	ENST00000519362	KLRC4-KLRK1	H3BQV0	150 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	LCAT	P04180	440 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	FCGR2A	P12318	317 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	CD82	P27701	267 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	HRH1	P35367	487 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	SOX8	P57073	446 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	GNG2	P59768	71 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	UBE2M	P61081	183 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	CXADR	P78310	365 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	PLGLB1	Q02325	96 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	RIPPLY1	Q0D2K3	151 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	MPPED2	Q15777	294 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	NKPD1	Q17RQ9	610 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	ATP1A1-AS1	Q5TC04	95 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	ZBTB37	Q5TC79	503 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	TMEM42	Q69YG0	159 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	ZFP62	Q8NB50	900 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	TNFAIP8L1	Q8WVP5	186 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	PIGT	Q969N2	578 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	SPSB1	Q96BD6	273 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	WDR89	Q96FK6	387 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	ARHGAP5-AS1	Q96IT6	56 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	TMPRSS13	Q9BYE2	586 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	SLC7A10	Q9NS82	523 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	PARPBP	Q9NWS1	579 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	EIF3K	Q9UBQ5	218 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	OPN4	Q9UHM6	478 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	MCTS1	Q9ULC4	181 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	VSIG4	Q9Y279	399 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	PLEKHA6	Q9Y2H5	1048 aa		10.78	□□□□□ -0.68
SPIDR-210	ENST00000519362	CNTRL	Q7Z7A1	2325 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	PLSCR5	A0PG75	271 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	PCNX2	A6NKB5	2137 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	ZNF724	A8MTY0	619 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	CDRT15L2	A8MXV6	281 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	PRR33	A8MZF0	331 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	RAD51D	O75771	328 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	FARS2	O95363	451 aa	Known RBP	10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	SYNGR4	O95473	234 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	IGHV3-9	P01782	118 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	MGMT	P16455	207 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	TGIF1	Q15583	401 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	SCGB2B2	Q4G0G5	96 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	TEX261	Q6UWH6	196 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	PLXDC2	Q6UX71	529 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	TMED4	Q7Z7H5	227 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	TUSC5	Q8IXB3	177 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	ZNF100	Q8IYN0	542 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	FTMT	Q8N4E7	242 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	ZDHHC22	Q8N966	263 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	FNDC9	Q8TBE3	224 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	OCSTAMP	Q9BR26	566 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	RGCC	Q9H4X1	137 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	ACKR4	Q9NPB9	350 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	GPR173	Q9NS66	373 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362		U3KQ87	197 aa		10.77	□□□□□ -0.68
SPIDR-210	ENST00000519362	OR6C65	A6NJZ3	312 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	TSC22D2	O75157	780 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	CSN2	P05814	226 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	CD46	P15529	392 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	HTR2B	P41595	481 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	ZNF81	P51508	661 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	TSPAN5	P62079	268 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	PPIA	P62937	165 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	PABPC1L2A	Q5JQF8	200 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	UXS1	Q8NBZ7	420 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	STEAP2	Q8NFT2	490 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	OR51T1	Q8NGJ9	327 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	ASB13	Q8WXK3	278 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	CYYR1	Q96J86	154 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	TMEM165	Q9HC07	324 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	B3GNT2	Q9NY97	397 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	ATPIF1	Q9UII2	106 aa		10.77	□□□□□ -0.69
SPIDR-210	ENST00000519362	MED13	Q9UHV7	2174 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	KNTC1	P50748	2209 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	hCG_38984	A0A1B0GV85	526 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	ARGFX	A6NJG6	315 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	GOSR2	O14653	212 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	RGS11	O94810	467 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	SIX6	O95475	246 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	ACTL6A	O96019	429 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	FTH1P19	P0C7X4	201 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	SERPINA2	P20848	420 aa		10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	ARF1	P84077	181 aa	Known RBP	10.76	□□□□□ -0.69
SPIDR-210	ENST00000519362	FAM3A	P98173	230 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms