RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 FAM205BPQ63HN1 556 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 LDHAL6AQ6ZMR3 332 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 GLT6D1Q7Z4J2 308 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 GOLGA7Q7Z5G4 137 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ARL10Q8N8L6 244 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ANGPTL6Q8NI99 470 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZNF418Q8TF45 676 aaPredicted RBP-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 TNFAIP8L1Q8WVP5 186 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 BAALCQ8WXS3 180 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR5P2Q8WZ92 322 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 DERL3Q96Q80 235 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 HBEGFQ99075 208 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ULBP1Q9BZM6 244 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 VCX3BQ9H321 246 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 RBKSQ9H477 322 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 AZI2Q9H6S1 392 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 MRPL39Q9NYK5 338 aaKnown RBP-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZNF780BQ9Y6R6 833 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ADGRB2O60241 1585 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 PKD1P98161 4303 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 NBEAL2Q6ZNJ1 2754 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 SYNRGQ9UMZ2 1314 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 AKAP9Q99996 3911 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR5B21A6NL26 309 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM86B1E9PN63 330 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 RNASEK-C17orf49H0YIS7 233 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 INE1O15225 51 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 CXCL13O43927 109 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 RDH16O75452 317 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 BCAS2O75934 225 aaPredicted RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 MT-ND3P03897 115 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM86B2P0C5J1 330 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 PSMB10P40306 273 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 ACAA2P42765 397 aaKnown RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 VSX2P58304 361 aaPredicted RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 DEFA5Q01523 94 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 BST1Q10588 318 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 BTG3Q14201 252 aaPredicted RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 LRRC26Q2I0M4 334 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZNF404Q494X3 552 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM229BQ4G0N7 80 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 C6orf99Q4VX62 202 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 GORABQ5T7V8 394 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 NKAIN2Q5VXU1 208 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 ASPGQ86U10 573 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 AQP12AQ8IXF9 295 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 ASCC1Q8N9N2 400 aaKnown RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 VPS37AQ8NEZ2 397 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 C16orf78Q8WTQ4 265 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 UBLCP1Q8WVY7 318 aaPredicted RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 TOLLIPQ9H0E2 274 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 TMEM27Q9HBJ8 222 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZCCHC17Q9NP64 241 aaKnown RBP-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 ACP6Q9NPH0 428 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 C1orf123Q9NWV4 160 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 AURKCQ9UQB9 309 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM169AQ9Y6X4 670 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 URGCP-MRPS24S4R325 110 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 NBASA2RRP1 2371 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 SETD5Q9C0A6 1442 aa-2.59□□□□□ -2.82
SNORA40.16-201ENST00000517238 UNC13CQ8NB66 2214 aa-2.6□□□□□ -2.82
SNORA40.16-201ENST00000517238 IGHV1-69DA0A0B4J2H0 117 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 A0A0D9SG52 128 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 ODAMA1E959 279 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 C11orf86A6NJI1 115 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 H0YC42 278 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 ITGB1BP1O14713 200 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 TAAR5O14804 337 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 LANCL1O43813 399 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 OR4F21O95013 312 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 GPR75O95800 540 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 RPN1P04843 607 aaKnown RBP-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 SERPIND1P05546 499 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 SEC11BP0C7V7 166 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 OR5H8P0DN80 308 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 POLR2EP19388 210 aaKnown RBP-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 COX5AP20674 150 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 SLC2A5P22732 501 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 POLR2IP36954 125 aaKnown RBP-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 RBM34P42696 430 aaKnown RBP-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 PPP1CAP62136 330 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 TNFRSF17Q02223 184 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 GANABQ14697 944 aaKnown RBP-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 WDR43Q15061 677 aaKnown RBP eCLIP-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 NCF4Q15080 339 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 CDO1Q16878 200 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 PABPC1L2AQ5JQF8 200 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 FAM162BQ5T6X4 162 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 OR4F3Q6IEY1 312 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 FAM173BQ6P4H8 233 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 IDO2Q6ZQW0 420 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 RTL4Q6ZR62 310 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 STKLD1Q8NE28 680 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 OR56A4Q8NGH8 313 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 WFDC5Q8TCV5 224 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 LRRC29Q8WV35 223 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 CYGBQ8WWM9 190 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 TMEM54Q969K7 222 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 TMEM45BQ96B21 275 aa-2.6□□□□□ -2.83
SNORA40.16-201ENST00000517238 MUCL1Q96DR8 90 aa-2.6□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms