RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 FFAR1O14842 300 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 AKR7A2O43488 359 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 XRCC2O43543 280 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 JUNBP17275 347 aaPredicted RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 RPS27P42677 84 aaKnown RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 RPS6KA3P51812 740 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 SLC7A2P52569 658 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 CAPZA1P52907 286 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 IL5RAQ01344 420 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 SPIBQ01892 262 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 MEPCEQ7L2J0 689 aaKnown RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 RNF113BQ8IZP6 322 aaKnown RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 OR5K1Q8NHB7 308 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 LYZL4Q96KX0 146 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 PRR25Q96S07 402 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 NMNAT3Q96T66 252 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 COPS4Q9BT78 406 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 PAPOLGQ9BWT3 736 aaKnown RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 FN3KQ9H479 309 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 RPRD1BQ9NQG5 326 aaKnown RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 NLKQ9UBE8 527 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 ZMAT5Q9UDW3 170 aaKnown RBP8.4□□□□□ -1.06
CLDND1-231ENST00000515620 TMEM5Q9Y2B1 443 aa8.4□□□□□ -1.06
CLDND1-231ENST00000515620 SACSQ9NZJ4 4579 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 IGKV1D-17A0A075B6S4 117 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 TBX1O43435 398 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 PTP4A3O75365 173 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 RHBDL1O75783 438 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 TXNDC12O95881 172 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 RENP00797 406 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 ARG1P05089 322 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 CCL3L1P16619 93 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 OTX1P32242 354 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-231ENST00000515620 DDOSTP39656 456 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 PRKXP51817 358 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 FXYD6P3P58550 94 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 AGBL2Q5U5Z8 902 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 ZFAND6Q6FIF0 208 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 NANOGP8Q6NSW7 305 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 DPY19L2P2Q6ZN68 376 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 RRM2BQ7LG56 351 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 SLC16A9Q7RTY1 509 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 OR51D1Q8NGF3 324 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 OR10Z1Q8NGY1 313 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 RSRC1Q96IZ7 334 aaKnown RBP8.39□□□□□ -1.07
CLDND1-231ENST00000515620 ERMAPQ96PL5 475 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-231ENST00000515620 MICU1Q9BPX6 476 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 RABEP2Q9H5N1 569 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 MRPL22Q9NWU5 206 aaKnown RBP8.39□□□□□ -1.07
CLDND1-231ENST00000515620 NKIRAS1Q9NYS0 192 aa8.39□□□□□ -1.07
CLDND1-231ENST00000515620 hCG_1809904A0A1W2PP81 198 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 A0A1W2PPE2 198 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 A0A1W2PPH5 198 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 A0A1W2PR64 198 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 A0A1W2PRV1 198 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 RAMP3O60896 148 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 LPLP06858 475 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 THBS3P49746 956 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 SLC25A1P53007 311 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 RPL31P62899 125 aaKnown RBP8.38□□□□□ -1.07
CLDND1-231ENST00000515620 FAM3AP98173 230 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 TIGD6Q17RP2 521 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 LDLRAD2Q5SZI1 272 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 TMEM200BQ69YZ2 307 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 ERICH5Q6P6B1 374 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 KCTD18Q6PI47 426 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-231ENST00000515620 KCTD8Q6ZWB6 473 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 VTCN1Q7Z7D3 282 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 MREGQ8N565 214 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 CYB561A3Q8NBI2 242 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 OR52H1Q8NGJ2 320 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 OR4C15Q8NGM1 316 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 OR4K13Q8NH42 304 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 SPSB4Q96A44 273 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 MALSU1Q96EH3 234 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 RCHY1Q96PM5 261 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 RTL8AQ9BWD3 113 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 TMEM120AQ9BXJ8 343 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 USE1Q9NZ43 259 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 KCNG2Q9UJ96 466 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 RHBDD3Q9Y3P4 386 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 TBL2Q9Y4P3 447 aaKnown RBP8.38□□□□□ -1.07
CLDND1-231ENST00000515620 LRP12Q9Y561 859 aa8.38□□□□□ -1.07
CLDND1-231ENST00000515620 hCG_38984A0A1B0GV85 526 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 ANXA2P2A6NMY6 339 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 ODF3BA8MYP8 253 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 PSG2P11465 335 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 PSKH1P11801 424 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 HIST1H1CP16403 213 aaKnown RBP8.37□□□□□ -1.07
CLDND1-231ENST00000515620 ZNF823P16415 610 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 GLRA1P23415 457 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 KDELR2P33947 212 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 CEBPDP49716 269 aaPredicted RBP8.37□□□□□ -1.07
CLDND1-231ENST00000515620 DYNLT3P51808 116 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 LUMP51884 338 aaPredicted RBP8.37□□□□□ -1.07
CLDND1-231ENST00000515620 SELENOWP63302 87 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 SLC34A1Q06495 639 aa8.37□□□□□ -1.07
CLDND1-231ENST00000515620 ZNF273Q14593 569 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms