RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 OR5P3Q8WZ94 311 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 PIGCQ92535 297 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 CCL17Q92583 94 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 HPS1Q92902 700 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 TIMD4Q96H15 378 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 TECTBQ96PL2 329 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 FN3KRPQ9HA64 309 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 GCM1Q9NP62 436 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 ZNF275Q9NSD4 429 aaPredicted RBP10.07□□□□□ -0.8
SNF8-215ENST00000515572 TMEM106BQ9NUM4 274 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 UBAP1Q9NZ09 502 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 ERVK-18Q9QC07 812 aa10.07□□□□□ -0.8
SNF8-215ENST00000515572 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 TRIM64A6NGJ6 449 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 TRIM64BA6NI03 449 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 OR5B21A6NL26 309 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 TMEM210A6NLX4 147 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 LRRC30A6NM36 301 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 LYNX1G3V0Z9 82 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 SERPINA3P01011 423 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 NRASP01111 189 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 LYNX1P0DP58 116 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 EEF1B2P24534 225 aaKnown RBP10.06□□□□□ -0.8
SNF8-215ENST00000515572 GPR6P46095 362 aaPredicted RBP10.06□□□□□ -0.8
SNF8-215ENST00000515572 GTF2A1P52655 376 aaPredicted RBP10.06□□□□□ -0.8
SNF8-215ENST00000515572 IRF3Q14653 427 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 SPHARQ15513 63 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 ZNF181Q2M3W8 571 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 CEACAM21Q3KPI0 293 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 SPRNQ5BIV9 151 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 OR11L1Q8NGX0 322 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 Q8TCH9 128 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 RAB1CQ92928 201 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 DVL3Q92997 716 aaPredicted RBP10.06□□□□□ -0.8
SNF8-215ENST00000515572 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 REG4Q9BYZ8 158 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
SNF8-215ENST00000515572 LOC100289279A0A1B0GTE1 492 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 ANKRD61A6NGH8 418 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 PPIHO43447 177 aaKnown RBP10.05□□□□□ -0.8
SNF8-215ENST00000515572 GATBO75879 557 aaKnown RBP10.05□□□□□ -0.8
SNF8-215ENST00000515572 LALBAP00709 142 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 IRF2P14316 349 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 FOSL1P15407 271 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 ZNF20P17024 532 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 USF1P22415 310 aaPredicted RBP10.05□□□□□ -0.8
SNF8-215ENST00000515572 GNG3P63215 75 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 ACSM1Q08AH1 577 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 PRAMEF6Q5VXH4 476 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 DMKNQ6E0U4 476 aaPredicted RBP10.05□□□□□ -0.8
SNF8-215ENST00000515572 XAF1Q6GPH4 301 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 MOB3CQ70IA8 216 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 MOGAT3Q86VF5 341 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 OR1M1Q8NGA1 313 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 OR5A2Q8NGI9 324 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 OR13C3Q8NGS6 347 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 GPR148Q8TDV2 347 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 HPSE2Q8WWQ2 592 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 SGCDQ92629 289 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 RNF170Q96K19 258 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 PDCD1LG2Q9BQ51 273 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 BPESC1Q9GZL8 116 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 CHST5Q9GZS9 411 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 PPP1R3EQ9H7J1 279 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 TREM2Q9NZC2 230 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 LRRC42Q9Y546 428 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 CR1P17927 2039 aa10.05□□□□□ -0.8
SNF8-215ENST00000515572 MAP1AP78559 2803 aaPredicted RBP10.05□□□□□ -0.8
SNF8-215ENST00000515572 LRP5LA4QPB2 252 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 A6NLC8 198 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 TMEM178BH3BS89 294 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 H3BSH0 61 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 H7C1Q1 480 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 PLPP2O43688 288 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 FSTL3O95633 263 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 MT-ND2P03891 347 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 CD1AP06126 327 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 GRPP07492 148 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 CD99P14209 185 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 THBS2P35442 1172 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 CHN2P52757 468 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 LOXL1Q08397 574 aaPredicted RBP10.04□□□□□ -0.8
SNF8-215ENST00000515572 ZNF154Q13106 437 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 MED22Q15528 200 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 MPPED2Q15777 294 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 TBCEQ15813 527 aaPredicted RBP10.04□□□□□ -0.8
SNF8-215ENST00000515572 YIF1BQ5BJH7 314 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 FAM76BQ5HYJ3 339 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 CEP78Q5JTW2 689 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 KCTD8Q6ZWB6 473 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 WDR86Q86TI4 376 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 OR51A4Q8NGJ6 313 aa10.04□□□□□ -0.8
SNF8-215ENST00000515572 ZNF420Q8TAQ5 688 aaPredicted RBP10.04□□□□□ -0.8
SNF8-215ENST00000515572 C18orf12Q96KH6 178 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms