RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 LRP5LA4QPB2 252 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
TRIO-222ENST00000515144 MTNR1BP49286 362 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 SIGLEC11Q96RL6 698 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 ATP6V1G1O75348 118 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 RHOUQ7L0Q8 258 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
TRIO-222ENST00000515144 PLEKHB1Q9UF11 243 aaPredicted RBP12.88□□□□□ -0.35
TRIO-222ENST00000515144 MLF1P58340 268 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 GGTLC2Q14390 218 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 SAMD10Q9BYL1 202 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 C20orf141Q9NUB4 165 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 CACNA1BQ00975 2339 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 CADP27708 2225 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 C21orf140B9A014 251 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 HLA-DOBP13765 273 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 CEACAM6P40199 344 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 THBS3P49746 956 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 P2RX3P56373 397 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 FAHD2BQ6P2I3 314 aaPredicted RBP12.87□□□□□ -0.35
TRIO-222ENST00000515144 NPEPL1Q8NDH3 523 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 FAHD2AQ96GK7 314 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 TMEM74BQ9NUR3 256 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 CD300AQ9UGN4 299 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 PRR35P0CG20 571 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 HLXQ14774 488 aaPredicted RBP12.87□□□□□ -0.35
TRIO-222ENST00000515144 ERGIC1Q969X5 290 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 M0QZ24 198 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 OR7C2O60412 319 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 ADH4P08319 380 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 ARRB2P32121 409 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 PLAC9Q5JTB6 97 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 ZNF705FA8MVS1 300 aaPredicted RBP12.87□□□□□ -0.35
TRIO-222ENST00000515144 ZNF705DP0CH99 300 aaPredicted RBP12.87□□□□□ -0.35
TRIO-222ENST00000515144 ZNF705BP0CI00 300 aaPredicted RBP12.87□□□□□ -0.35
TRIO-222ENST00000515144 RAP2BP61225 183 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 CEPT1Q9Y6K0 416 aa12.87□□□□□ -0.35
TRIO-222ENST00000515144 DNASE2O00115 360 aaPredicted RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 NUPL2O15504 423 aaKnown RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 ADAM20O43506 726 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 MOSPD3O75425 235 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 GABRA1P14867 456 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 CSN1S1P47710 185 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 ZNF768Q9H5H4 540 aaKnown RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 SFTPCP11686 197 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 NANOGP1Q8N7R0 232 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 OR52I2Q8NH67 350 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 LRFN5Q96NI6 719 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 SAP30LQ9HAJ7 183 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 PRPH2P23942 346 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 SNRPGP62308 76 aaKnown RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 FAM74A1Q5RGS3 127 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 TERTO14746 1132 aaKnown RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 UBBP0CG47 229 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 TGFBR1P36897 503 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 PIGPP57054 158 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 DBX2Q6ZNG2 339 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 ID4P47928 161 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 RFX2P48378 723 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 DLX5P56178 289 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 ISXQ2M1V0 245 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 MAGT1Q9H0U3 335 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 SSX4O60224 188 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 HOXC4P09017 264 aaPredicted RBP12.86□□□□□ -0.35
TRIO-222ENST00000515144 OR13G1Q8NGZ3 307 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 UCN2Q96RP3 112 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
TRIO-222ENST00000515144 KIR2DS1A0A191URI9 304 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 KIR2DS4P43632 304 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 UBE2G2P60604 165 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 KIR2DS1Q14954 304 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 CTU2Q2VPK5 515 aaKnown RBP12.85□□□□□ -0.35
TRIO-222ENST00000515144 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 PRAF2O60831 178 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 NOXA1Q86UR1 476 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 HSD17B11Q8NBQ5 300 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 DHRS9Q9BPW9 319 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 MRPL22Q9NWU5 206 aaKnown RBP12.85□□□□□ -0.35
TRIO-222ENST00000515144 VWA8A3KMH1 1905 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 K7EQM0 130 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 ELK1P19419 428 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 FUT6P51993 359 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 PEA15Q15121 130 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 NANPQ8TBE9 248 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 LRRC29Q8WV35 223 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 NPTNQ9Y639 398 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■□ 23.6
TRIO-222ENST00000515144 SLC31A2O15432 143 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 TBPP20226 339 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 LIPAP38571 399 aa12.85□□□□□ -0.35
TRIO-222ENST00000515144 SELENOPP49908 381 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms