RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 SRRM5B3KS81 715 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 CASQ2O14958 399 aaPredicted RBP8.09□□□□□ -1.11
RNF4-221ENST00000513643 NDUFA2O43678 99 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 DHRS3O75911 302 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 PPIAL4GP0DN37 164 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 EGR1P18146 543 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 AMY2BP19961 511 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 HNF1AP20823 631 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 CD80P33681 288 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 MAP2K3P46734 347 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 CSNK2BP67870 215 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 LCN2P80188 198 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 ZSCAN26Q16670 478 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 C11orf91Q3C1V1 193 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 CEACAM21Q3KPI0 293 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 ATPAF1Q5TC12 328 aaPredicted RBP8.09□□□□□ -1.11
RNF4-221ENST00000513643 FAHD2BQ6P2I3 314 aaPredicted RBP8.09□□□□□ -1.11
RNF4-221ENST00000513643 C1QL2Q7Z5L3 287 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 FAM90A1Q86YD7 464 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 FTMTQ8N4E7 242 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 OR5A2Q8NGI9 324 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 OR10Z1Q8NGY1 313 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 APH1BQ8WW43 257 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 LGALS12Q96DT0 336 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 NEIL1Q96FI4 390 aaPredicted RBP8.09□□□□□ -1.11
RNF4-221ENST00000513643 FAHD2AQ96GK7 314 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 PAPOLGQ9BWT3 736 aaKnown RBP8.09□□□□□ -1.11
RNF4-221ENST00000513643 OR51I2Q9H344 312 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 METTL17Q9H7H0 456 aaPredicted RBP8.09□□□□□ -1.11
RNF4-221ENST00000513643 UBAP1Q9NZ09 502 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 CTSZQ9UBR2 303 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 AASSQ9UDR5 926 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 OR52A1Q9UKL2 312 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 IKZF2Q9UKS7 526 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 ORC6Q9Y5N6 252 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 GMPPBQ9Y5P6 360 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 KIR2DS1A0A191URI9 304 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 OOEPA6NGQ2 149 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 LOC110117498-PIK3R3F6TDL0 507 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 CDIPTO14735 213 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 PHF1O43189 567 aaPredicted RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 MPZL2O60487 215 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 WBP4O75554 376 aaKnown RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 APOL3O95236 402 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 IGHA1P01876 353 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 KRT8P05787 483 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 GRPP07492 148 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 IRF2P14316 349 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 MUC1P15941 1255 aaPredicted RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 TGM4P49221 684 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 ADARB1P78563 741 aaKnown RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 RIPPLY1Q0D2K3 151 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 GFOD2Q3B7J2 385 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 DCAF12L2Q5VW00 463 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 LPCAT4Q643R3 524 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 WDR25Q64LD2 544 aaPredicted RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 PLEKHG7Q6ZR37 379 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 KCTD20Q7Z5Y7 419 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 PRSS35Q8N3Z0 413 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 PACRGLQ8N7B6 248 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 C19orf18Q8NEA5 215 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 SEMA6DQ8NFY4 1073 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 OR8S1Q8NH09 359 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 C12orf43Q96C57 262 aaKnown RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 RNFT2Q96EX2 444 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 MICU1Q9BPX6 476 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 SSBP3Q9BWW4 388 aaPredicted RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 JAM3Q9BX67 310 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 TTTY10Q9BZA0 68 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 TRIM36Q9NQ86 728 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 C8orf4Q9NR00 106 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 IMPAD1Q9NX62 359 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 SMPD3Q9NY59 655 aaPredicted RBP8.08□□□□□ -1.12
RNF4-221ENST00000513643 PCDHB10Q9UN67 800 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 SLC22A13Q9Y226 551 aa8.08□□□□□ -1.12
RNF4-221ENST00000513643 LOC105371242A0A075B767 164 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 TRAV38-1A0A0B4J264 116 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 IGHV2-70DA0A0C4DH43 119 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 PQLC2LA1A4F0 135 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ANXA2P2A6NMY6 339 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 C22orf46C9J442 243 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 NOS1APO75052 506 aaPredicted RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 MTRF1O75570 445 aaKnown RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 BAG2O95816 211 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ISG15P05161 165 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ACAA1P09110 424 aaPredicted RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 DBTP11182 482 aaKnown RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 RPS2P15880 293 aaKnown RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 FAHP16930 419 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 GNALP38405 381 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 KIR3DL2P43630 455 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 PITPNBP48739 271 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 NPY4RP50391 375 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 CCR9P51686 369 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 NANOS3P60323 173 aaKnown RBP8.07□□□□□ -1.12
RNF4-221ENST00000513643 GNG3P63215 75 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ACTC1P68032 377 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ACTA1P68133 377 aa8.07□□□□□ -1.12
RNF4-221ENST00000513643 ZNF91Q05481 1191 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms