RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 SYT1P21579 422 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CD40LGP29965 261 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 EVI2BP34910 448 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 P2RY2P41231 377 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 RBM34P42696 430 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 MAGEA6P43360 314 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CDC34P49427 236 aaPredicted RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 EMP2P54851 167 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 MLF1P58340 268 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 KRTAP10-1P60331 282 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 RPS23P62266 143 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 CRADDP78560 199 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 MRPS15P82914 257 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZNF816Q0VGE8 651 aaPredicted RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 CDC20Q12834 499 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 STK38Q15208 465 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 USF2Q15853 346 aaPredicted RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 LY6EQ16553 131 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 PRSS8Q16651 343 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 NDUFAF6Q330K2 333 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 MPV17L2Q567V2 206 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 STUMQ69YW2 141 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZFP1Q6P2D0 407 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 LRRC6Q86X45 466 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 TMEM25Q86YD3 366 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CBLN2Q8IUK8 224 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 WDFY1Q8IWB7 410 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 FAM71AQ8IYT1 594 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 SYS1Q8N2H4 156 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ARHGAP18Q8N392 663 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CDRT4Q8N9R6 151 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DNAAF3Q8N9W5 541 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 OR8J2Q8NGG1 315 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 OR6N1Q8NGY5 312 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 LINC01560Q8TB33 94 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 OR51E1Q8TCB6 317 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 GTF2H4Q92759 462 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ISOC2Q96AB3 205 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 FAM131CQ96AQ9 280 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 RPEQ96AT9 228 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 RBMXL1Q96E39 390 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZNF488Q96MN9 340 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 GLT1D1Q96MS3 346 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZNF75AQ96N20 296 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 RNF5Q99942 180 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZNF2Q9BSG1 426 aaPredicted RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 OSBPL11Q9BXB4 747 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 BEX2Q9BXY8 128 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 NDEL1Q9GZM8 345 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 NSRP1Q9H0G5 558 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 OR52D1Q9H346 318 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 TMEM38AQ9H6F2 299 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 EDA2RQ9HAV5 297 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 MRM3Q9HC36 420 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 ANKHQ9HCJ1 492 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 IMP3Q9NV31 184 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 CLN6Q9NWW5 311 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DUX4Q9UBX2 424 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ENOPH1Q9UHY7 261 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 FLVCR2Q9UPI3 526 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 RCL1Q9Y2P8 373 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 YARS2Q9Y2Z4 477 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 PUS1Q9Y606 427 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNF4-219ENST00000513450 URGCP-MRPS24S4R325 110 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ADGRA3Q8IWK6 1321 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 JCADQ9P266 1359 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 AHDC1Q5TGY3 1603 aaPredicted RBP1.29□□□□□ -2.2
RNF4-219ENST00000513450 IGHV3OR16-9A0A0B4J2B5 98 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 CENPVL3A0A0U1RRI6 287 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 A0A1W2PRD5 423 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 MGAT4DA6NG13 374 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 TVP23AA6NH52 213 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 ZNF850A8MQ14 1090 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 SYCE1LA8MT33 242 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 PRAMEF26H0Y7S4 382 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 RNASEK-C17orf49H0YIS7 233 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 H0YJW9 148 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 CHST10O43529 356 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 TRAPPC3O43617 180 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 FARS2O95363 451 aaKnown RBP1.29□□□□□ -2.2
RNF4-219ENST00000513450 RPN2P04844 631 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 IL4P05112 153 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 KRT16P08779 473 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 OR8U9P0C7N5 309 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 SLC35E2BP0CK96 405 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 NEFHP12036 1026 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 HLA-GP17693 338 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 IL1RNP18510 177 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 RAB4AP20338 218 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 PSMB5P28074 263 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 HTR2CP28335 458 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 CSKP41240 450 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 GPR1P46091 355 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 SERPINB8P50452 374 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 UBE2KP61086 200 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 CDK5Q00535 292 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 DGCR6Q14129 220 aa1.29□□□□□ -2.2
RNF4-219ENST00000513450 MAD2L1BPQ15013 274 aaPredicted RBP1.29□□□□□ -2.2
RNF4-219ENST00000513450 SNRNP35Q16560 246 aaKnown RBP1.29□□□□□ -2.2
RNF4-219ENST00000513450 EXOC3L4Q17RC7 722 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms