RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 DHRS7BQ6IAN0 325 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ATRAIDQ6UW56 229 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 SLC38A9Q8NBW4 561 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 OR13D1Q8NGV5 346 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 A0A1W2PPE2 198 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 FGF17O60258 216 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ADAM11O75078 769 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RPL29P47914 159 aaKnown RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ARSJQ5FYB0 599 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ARHGEF39Q8N4T4 335 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 OR52N5Q8NH56 324 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 SP7Q8TDD2 431 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 INTS12Q96CB8 462 aaKnown RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 POM121Q96HA1 1249 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 FKRPQ9H9S5 495 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 LOC102725191A0A1B0GVB3 256 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 PTBP3O95758 552 aaKnown RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 IL9P15248 144 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 MUC1P15941 1255 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 MSMO1Q15800 293 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 GPX8Q8TED1 209 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 LINC00615Q96LM1 132 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 SPACA5Q96QH8 159 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 GDF15Q99988 308 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 PARP11Q9NR21 331 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 IGHV3-20A0A0C4DH32 117 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 CBY3A6NI87 242 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 YIF1AO95070 293 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 GABREP78334 506 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 OTOSQ8NHW6 89 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 BAHD1Q8TBE0 780 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 OR51B6Q9H340 312 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 AMDHD2Q9Y303 409 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 PPIL1Q9Y3C6 166 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 M0R296 226 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 SEMA7AO75326 666 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 CST2P09228 141 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF25P17030 456 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 EMDP50402 254 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 BIDP55957 195 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 C9orf135Q5VTT2 229 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 C1orf140Q5VVS0 124 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 MOB3CQ70IA8 216 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 RPS19BP1Q86WX3 136 aaKnown RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF107Q9UII5 783 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 PRSS37A4D1T9 235 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 SHISA7A6NL88 538 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 ADAP1O75689 374 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 OR5H8P0DN80 308 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 GABRG2P18507 467 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 BCKDHBP21953 392 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 RBPJQ06330 500 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 DOK3Q7L591 496 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF439Q8NDP4 499 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 OR2A1Q8NGT9 310 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 IFI44Q8TCB0 444 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 OR51E1Q8TCB6 317 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 RTN4IP1Q8WWV3 396 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
TCOF1-211ENST00000513346 TWSG1Q9GZX9 223 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 GCM1Q9NP62 436 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 ST6GALNAC2Q9UJ37 374 aa10.1□□□□□ -0.79
TCOF1-211ENST00000513346 A0A1B0GTH9 108 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 C17orf112F2Z3M2 114 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 MSX1P28360 303 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 PIGPP57054 158 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 TMEM33P57088 247 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 ZP1P60852 638 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 PCBD1P61457 104 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 CLEC12BQ2HXU8 276 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 PLXDC2Q6UX71 529 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF793Q6ZN11 406 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 AAED1Q7RTV5 226 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 AMER3Q8N944 861 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 TMEM37Q8WXS4 190 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 WNT2BQ93097 391 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 LHX4Q969G2 390 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF764Q96H86 408 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-211ENST00000513346 PRDM7Q9NQW5 492 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 B9D1Q9UPM9 204 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 CXorf51AA0A1B0GTR3 108 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 NTN1O95631 604 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 GPANK1O95872 356 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 SLC2A1P11166 492 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-211ENST00000513346 THNSL2Q86YJ6 484 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 FAM58AQ8N1B3 248 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 PIGTQ969N2 578 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 NKX3-1Q99801 234 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-211ENST00000513346 GPR173Q9NS66 373 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 OSGIN2Q9Y236 505 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 A0A087WUJ7 227 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 OR5H15A6NDH6 313 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 OR5H1A6NKK0 313 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 ANKRD30BLA7E2S9 258 aa10.09□□□□□ -0.79
TCOF1-211ENST00000513346 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms