RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NCR3LG1Q68D85 454 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF826PQ6ZT77 177 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 PRSS45Q7RTY3 260 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 VMO1Q7Z5L0 202 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 TIGD4Q8IY51 512 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 OR1M1Q8NGA1 313 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 TEX47Q8TBZ9 253 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 LRRC29Q8WV35 223 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 ST8SIA4Q92187 359 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 AMELYQ99218 206 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 MICU1Q9BPX6 476 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 ABHD6Q9BV23 337 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 FAM234AQ9H0X4 552 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 FBLN5Q9UBX5 448 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 ZNF391Q9UJN7 358 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
VEGFA-216ENST00000512683 TCRBV3S1A0A5B6 114 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 TMEM210A6NLX4 147 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 ANXA2P2A6NMY6 339 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 RNASEK-C17orf49H0YIS7 233 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 H3BN98 237 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 M0R1W7 72 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 GLCEO94923 617 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 PRKACGP22612 351 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 GSTT1P30711 240 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 GNALP38405 381 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 CDK5Q00535 292 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 EIF2B1Q14232 305 aaKnown RBP10.33□□□□□ -0.76
VEGFA-216ENST00000512683 GINS1Q14691 196 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 AANATQ16613 207 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 TIGD6Q17RP2 521 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 DHRS7BQ6IAN0 325 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-216ENST00000512683 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 Q6ZSV7 163 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 SHFQ7M4L6 423 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 SLC16A9Q7RTY1 509 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 ERI1Q8IV48 349 aaKnown RBP10.33□□□□□ -0.76
VEGFA-216ENST00000512683 PAPD5Q8NDF8 572 aaKnown RBP10.33□□□□□ -0.76
VEGFA-216ENST00000512683 RNF133Q8WVZ7 376 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 INTS14Q96SY0 518 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 CCL13Q99616 98 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 DCTN5Q9BTE1 182 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 OR10A2Q9H208 303 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 HAO2Q9NYQ3 351 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 ZNRD1Q9P1U0 126 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF816-ZNF321PA0A0X1KG74 233 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 GNGT2O14610 69 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 NPFFO15130 113 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 GYG2O15488 501 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 FCN3O75636 299 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 PAHP00439 452 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 CX3CR1P49238 355 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 CAV3P56539 151 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 BLMHQ13867 455 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 KLHL12Q53G59 568 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 WDR38Q5JTN6 314 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 KRT74Q7RTS7 529 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 OR6N2Q8NGY6 317 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 BCAS4Q8TDM0 211 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 OTULINQ96BN8 352 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 REEP6Q96HR9 211 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 PKP2Q99959 881 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 METTL8Q9H825 291 aaKnown RBP10.32□□□□□ -0.76
VEGFA-216ENST00000512683 ONECUT1Q9UBC0 465 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 POMPQ9Y244 141 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF281Q9Y2X9 895 aa10.32□□□□□ -0.76
VEGFA-216ENST00000512683 SF3B6Q9Y3B4 125 aaKnown RBP10.32□□□□□ -0.76
VEGFA-216ENST00000512683 hCG_38984A0A1B0GV85 526 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-216ENST00000512683 SELENOFO60613 162 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 FKBP6O75344 327 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 CST4P01036 141 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 ANXA2P07355 339 aaKnown RBP10.31□□□□□ -0.76
VEGFA-216ENST00000512683 OSMP13725 252 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 HOXB6P17509 224 aaKnown RBP10.31□□□□□ -0.76
VEGFA-216ENST00000512683 POU1F1P28069 291 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 HSD11B1P28845 292 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 OPRL1P41146 370 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 KIR2DS4P43632 304 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 GSK3AP49840 483 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF121P58317 390 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-216ENST00000512683 CBX1P83916 185 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 FLOT2Q14254 428 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 DNAL1Q4LDG9 190 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 FBLN7Q53RD9 439 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 STUMQ69YW2 141 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 PLBD1Q6P4A8 553 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 WDR86Q86TI4 376 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 SPATA24Q86W54 205 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 BEND2Q8NDZ0 799 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 OR5D13Q8NGL4 314 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 TNFRSF14Q92956 283 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 RAB3IPQ96QF0 476 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-216ENST00000512683 RTL8AQ9BWD3 113 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 PPP1R3EQ9H7J1 279 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms