RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	CLDN34	H7C241	214 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	ADAM20	O43506	726 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	ENSA	O43768	121 aa	Known RBP	10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	ECD	O95905	644 aa	Predicted RBP	10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	GYPA	P02724	150 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	FCGR1A	P12314	374 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	MMP9	P14780	707 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	AMY2B	P19961	511 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	PRTN3	P24158	256 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	GNAL	P38405	381 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	MAP2K3	P46734	347 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	TGM4	P49221	684 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	CSNK2B	P67870	215 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	LCN1P1	Q5VSP4	162 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	C1orf146	Q5VVC0	180 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081		Q6ZSR3	168 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	AMIGO2	Q86SJ2	522 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	TCEANC	Q8N8B7	351 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	LRTOMT	Q8WZ04	291 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	C12orf43	Q96C57	262 aa	Known RBP	10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	MNT	Q99583	582 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	MICU1	Q9BPX6	476 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	MRO	Q9BYG7	248 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	PRRG3	Q9BZD7	231 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	COPS3	Q9UNS2	423 aa		10.06	□□□□□ -0.8
CLDND1-223	ENST00000511081	SLC22A31	A6NKX4	558 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ANXA2P2	A6NMY6	339 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZNF850	A8MQ14	1090 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	CDIPT	O14735	213 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	FGF12	P61328	243 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	PRDX4	Q13162	271 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	MICB	Q29980	383 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	GFOD2	Q3B7J2	385 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZBTB37	Q5TC79	503 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	C12orf54	Q6X4T0	127 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	BOLL	Q8N9W6	283 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	LY6G5B	Q8NDX9	201 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	LRRC29	Q8WV35	223 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	HPSE2	Q8WWQ2	592 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	PPP1R14A	Q96A00	147 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	CENPN	Q96H22	339 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	PKP2	Q99959	881 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	RTL8A	Q9BWD3	113 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	PAPOLG	Q9BWT3	736 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	OSBPL10	Q9BXB5	764 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	PBOV1	Q9GZY1	135 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	DNTTIP1	Q9H147	329 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	RASSF4	Q9H2L5	321 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZMAT3	Q9HA38	289 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ADGRL4	Q9HBW9	690 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	NUFIP1	Q9UHK0	495 aa	Known RBP	10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ENOPH1	Q9UHY7	261 aa		10.05	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	hCG_1807616	A0A1W2PRN6	198 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZNF879	B4DU55	563 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081		E9PQ18	207 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	PSMD9	O00233	223 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	DVL1	O14640	695 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	GPR37	O15354	613 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	MRPL3	P09001	348 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	HKR1	P10072	659 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	CFP	P27918	469 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	POLR2I	P36954	125 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	MTNR1A	P48039	350 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	RIDA	P52758	137 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	POU4F2	Q12837	409 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	CEACAM21	Q3KPI0	293 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	WDR38	Q5JTN6	314 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	TREML4	Q6UXN2	200 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	RBMS3	Q6XE24	437 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZNF788	Q6ZQV5	615 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	LIAT1	Q6ZQX7	453 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	BTN2A1	Q7KYR7	527 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	PNLDC1	Q8NA58	520 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	SCCPDH	Q8NBX0	429 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	OR5A2	Q8NGI9	324 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	PIGC	Q92535	297 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	GCDH	Q92947	438 aa	Predicted RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	RNF170	Q96K19	258 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	WDFY2	Q96P53	400 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	TECTB	Q96PL2	329 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	CNN2	Q99439	309 aa	Known RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	CIB1	Q99828	191 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	GABARAPL3	Q9BY60	117 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	SIRPD	Q9H106	197 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	OR51I2	Q9H344	312 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	CLN6	Q9NWW5	311 aa		10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	SOX21	Q9Y651	276 aa	Predicted RBP	10.04	□□□□□ -0.8
CLDND1-223	ENST00000511081	CMYA5	Q8N3K9	4069 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	IGHV3OR15-7	A0A075B7D8	119 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	CENPVL3	A0A0U1RRI6	287 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081		A0A1B0GTI1	187 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	DNAJC9-AS1	A6NH13	148 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081		M0R129	80 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	P2RY10	O00398	339 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	TMPRSS2	O15393	492 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	TTR	P02766	147 aa		10.03	□□□□□ -0.8

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