RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PRDX6P30041 224 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 TGFBR2P37173 567 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 OPRL1P41146 370 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 TAF13Q15543 124 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 LY6EQ16553 131 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 FBLN7Q53RD9 439 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 FAM76BQ5HYJ3 339 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 TIGD4Q8IY51 512 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 GALNT4Q8N4A0 578 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 NPRL2Q8WTW4 380 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 OR5P3Q8WZ94 311 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 CFHR4Q92496 578 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 H1FXQ92522 213 aaKnown RBP12.96□□□□□ -0.33
RAB40C-202ENST00000509637 NSMCE2Q96MF7 247 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 TOR3AQ9H497 397 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 ARL8BQ9NVJ2 186 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 ZNF222Q9UK12 451 aa12.96□□□□□ -0.33
RAB40C-202ENST00000509637 IGKV1D-17A0A075B6S4 117 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 TCRBV5S2A0A599 114 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 MEIOCA2RUB1 952 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 H3BUX3 64 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 TNFRSF11BO00300 401 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 CHST1O43916 411 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 PRDX4Q13162 271 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 TIGD6Q17RP2 521 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 SLC36A1Q7Z2H8 476 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 LYG1Q8N1E2 194 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 IQCF1Q8N6M8 205 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 AQP11Q8NBQ7 271 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 BEND2Q8NDZ0 799 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 OR6K6Q8NGW6 343 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 LRTOMTQ8WZ04 291 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 C12orf43Q96C57 262 aaKnown RBP12.95□□□□□ -0.34
RAB40C-202ENST00000509637 CMTM5Q96DZ9 223 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 DUS3LQ96G46 650 aaKnown RBP12.95□□□□□ -0.34
RAB40C-202ENST00000509637 DMRTB1Q96MA1 342 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 PAPOLGQ9BWT3 736 aaKnown RBP12.95□□□□□ -0.34
RAB40C-202ENST00000509637 OPA3Q9H6K4 179 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 MAGEL2Q9UJ55 1249 aa12.95□□□□□ -0.34
RAB40C-202ENST00000509637 GPR37O15354 613 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 SIGLEC5O15389 551 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 ACAA1P09110 424 aaPredicted RBP12.94□□□□□ -0.34
RAB40C-202ENST00000509637 GRK5P34947 590 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 IFNGR2P38484 337 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 MAGEA2P43356 314 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 UBE2E1P51965 193 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 GRB2P62993 217 aaKnown RBP12.94□□□□□ -0.34
RAB40C-202ENST00000509637 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 C2orf68Q2NKX9 166 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 GFOD2Q3B7J2 385 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 CYP2R1Q6VVX0 501 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 DYNAPQ8N1N2 210 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 ZNRF1Q8ND25 227 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 OR52L1Q8NGH7 329 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 OR10Z1Q8NGY1 313 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 OR6N2Q8NGY6 317 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 SSX3Q99909 188 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 NIPSNAP1Q9BPW8 284 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 TBC1D23Q9NUY8 699 aa12.94□□□□□ -0.34
RAB40C-202ENST00000509637 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
RAB40C-202ENST00000509637 SLC25A10Q9UBX3 287 aaPredicted RBP12.94□□□□□ -0.34
RAB40C-202ENST00000509637 DNAH3Q8TD57 4116 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 OPN1MWP04001 364 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 OPN1MW2P0DN77 364 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 OPN1MW3P0DN78 364 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 PSG2P11465 335 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 KIR2DS4P43632 304 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 GUCA2AQ02747 115 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 MZT1Q08AG7 82 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 LRRC10Q5BKY1 277 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 LDLRAD2Q5SZI1 272 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 ERI1Q8IV48 349 aaKnown RBP12.93□□□□□ -0.34
RAB40C-202ENST00000509637 PGAM4Q8N0Y7 254 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 PPP1R14AQ96A00 147 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 MCUR1Q96AQ8 359 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 MEGF9Q9H1U4 602 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 C19orf12Q9NSK7 152 aa12.93□□□□□ -0.34
RAB40C-202ENST00000509637 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 PRR32B1ATL7 298 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 M0R1W7 72 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 SELENOFO60613 162 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 TIPRLO75663 272 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 KRT36O76013 467 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 CCNB2O95067 398 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 CST4P01036 141 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
RAB40C-202ENST00000509637 GABRA5P31644 462 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 NAA10P41227 235 aaPredicted RBP12.92□□□□□ -0.34
RAB40C-202ENST00000509637 HCCSP53701 268 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 CAV3P56539 151 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 HABP2Q14520 560 aaPredicted RBP12.92□□□□□ -0.34
RAB40C-202ENST00000509637 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 RPL13AP3Q6NVV1 102 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 CCBE1Q6UXH8 406 aaPredicted RBP12.92□□□□□ -0.34
RAB40C-202ENST00000509637 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 CMTM4Q8IZR5 234 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 OR8B12Q8NGG6 310 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 PIGCQ92535 297 aa12.92□□□□□ -0.34
RAB40C-202ENST00000509637 PGAM5Q96HS1 289 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms