RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 OR4C45A6NMZ5 311 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 J3QLW9 94 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 IFNL4K9M1U5 179 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 P2RY10O00398 339 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 DENRO43583 198 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 TCF21O43680 179 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF254O75437 659 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 FOXH1O75593 365 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 SULT1C4O75897 302 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 CYB5R3P00387 301 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 MT-ND2P03891 347 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 PIPP12273 146 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF19P17023 458 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 CCL1P22362 96 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 CRHBPP24387 322 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 THBS2P35442 1172 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 GSK3AP49840 483 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 RIDAP52758 137 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 SRSF2Q01130 221 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 ST3GAL4Q11206 333 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 OR8G1Q15617 311 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 GFOD2Q3B7J2 385 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 KCTD18Q6PI47 426 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 KRT74Q7RTS7 529 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 ELMOD2Q8IZ81 293 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 C1orf87Q8N0U7 546 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 YIPF7Q8N8F6 280 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 ZFP41Q8N8Y5 198 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 SETD9Q8NE22 299 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 OR13C5Q8NGS8 318 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 OR11L1Q8NGX0 322 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 OR14K1Q8NGZ2 314 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 OR2G2Q8NGZ5 317 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 SPATA3Q8NHX4 192 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF420Q8TAQ5 688 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 PGAM5Q96HS1 289 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 MEGF10Q96KG7 1140 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 Q96MT0 163 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 MNTQ99583 582 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 MROQ9BYG7 248 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 DUSP21Q9H596 190 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 C7orf69Q9H7B7 122 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 NIPAL2Q9H841 368 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 SP140LQ9H930 580 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 GCM1Q9NP62 436 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 GPR84Q9NQS5 396 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 GNG8Q9UK08 70 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 RAB26Q9ULW5 256 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 NOP16Q9Y3C1 178 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 RHBDD3Q9Y3P4 386 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM14AQ9Y6G1 99 aa7.35□□□□□ -1.23
PDLIM5-213ENST00000509357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.35□□□□□ -1.234e-6■□□□□ 9.7
PDLIM5-213ENST00000509357 FBN1P35555 2871 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 LOC105371242A0A075B767 164 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 A0A0U1RQV5 110 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 LOC110117498-PIK3R3F6TDL0 507 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM178BH3BS89 294 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 PHYHO14832 338 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 RGS9O75916 674 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF205O95201 554 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 IGHV2-70P01814 119 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 CDK1P06493 297 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 CA6P23280 308 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 MDH2P40926 338 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 ACTC1P68032 377 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 ACTA1P68133 377 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 ZMYND11Q15326 602 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 MPPED2Q15777 294 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 SNCBQ16143 134 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 TIGD6Q17RP2 521 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM155Q4W5P6 130 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 ESCO2Q56NI9 601 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 PRAMEF6Q5VXH4 476 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 LRRC28Q86X40 367 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 C11orf53Q8IXP5 236 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 MUC20Q8N307 709 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 BOLLQ8N9W6 283 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 FAM71F1Q96KD3 344 aaPredicted RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 OR5M11Q96RB7 305 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 PDCD1LG2Q9BQ51 273 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 SLC22A4Q9H015 551 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 VCXQ9H320 206 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 UFSP2Q9NUQ7 469 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 CNOT2Q9NZN8 540 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 V9GYS6 101 aa7.34□□□□□ -1.23
PDLIM5-213ENST00000509357 ARHGAP32A7KAX9 2087 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PPIAL4EA0A075B759 164 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ANKRD30BLA7E2S9 258 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PTGES3LE9PB15 166 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 PPIAL4DF5H284 164 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 J3QLI3 93 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 XRCC2O43543 280 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 FCN3O75636 299 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 ZFPL1O95159 310 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 FADS2O95864 444 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 APOC1P02654 83 aa7.33□□□□□ -1.24
PDLIM5-213ENST00000509357 KRT8P05787 483 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms