RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 LYL1P12980 280 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 FAM3AP98173 230 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 ABCA11PQ4W5N1 156 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 Q6ZSR6 202 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 NUDT22Q9BRQ3 303 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 TCEAL2Q9H3H9 227 aaPredicted RBP12.69□□□□□ -0.38
TRIM41-204ENST00000508930 TREM2Q9NZC2 230 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 KCNIP3Q9Y2W7 256 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 KLK3P07288 261 aaPredicted RBP12.69□□□□□ -0.38
TRIM41-204ENST00000508930 STARD6P59095 220 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 TLE3Q04726 772 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 TMEM182Q6ZP80 229 aaPredicted RBP12.69□□□□□ -0.38
TRIM41-204ENST00000508930 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 PLEKHA2Q9HB19 425 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 RAD51DO75771 328 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 CCL5P13501 91 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 MMP16P51512 607 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.69□□□□□ -0.38
TRIM41-204ENST00000508930 C11orf40Q8WZ69 217 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 ERGIC1Q969X5 290 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
TRIM41-204ENST00000508930 A6NCN8 305 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 AKT2P31751 481 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 TAGLN2P37802 199 aaKnown RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 DAP3P51398 398 aaKnown RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 UBE2KP61086 200 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 SLC35A1P78382 337 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 DEGS2Q6QHC5 323 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 STX12Q86Y82 276 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 ZNF283Q8N7M2 679 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 RHOVQ96L33 236 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 ZNF2Q9BSG1 426 aaPredicted RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 GNRH1P01148 92 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 AFF3P51826 1226 aaKnown RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 TSLPQ969D9 159 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 NELFAQ9H3P2 528 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 SRPK3Q9UPE1 567 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 STARD10Q9Y365 291 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 A0A0A6YYD4 124 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 IL11P20809 199 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 PTGER4P35408 488 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 SSTP61278 116 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 QRFPP83859 136 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 SP6Q3SY56 376 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 GPR84Q9NQS5 396 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
TRIM41-204ENST00000508930 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
TRIM41-204ENST00000508930 BLACEA4D250 179 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 FKTNO75072 461 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 TMEM50BP56557 158 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 NKX6-1P78426 367 aaPredicted RBP12.67□□□□□ -0.38
TRIM41-204ENST00000508930 PRTGQ2VWP7 1150 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 TMEM196Q5HYL7 178 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 PLXDC2Q6UX71 529 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 RNASE11Q8TAA1 199 aaKnown RBP12.67□□□□□ -0.38
TRIM41-204ENST00000508930 CYYR1Q96J86 154 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 FAM221BA6H8Z2 402 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 E5RGE8 158 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 SLC34A2O95436 690 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 KLF8O95600 359 aaPredicted RBP12.67□□□□□ -0.38
TRIM41-204ENST00000508930 CELA2BP08218 269 aaPredicted RBP12.67□□□□□ -0.38
TRIM41-204ENST00000508930 OR1D4P47884 311 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 SLC37A1P57057 533 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 GRINAQ7Z429 371 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 NSG2Q9Y328 171 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 C2orf72A6NCS6 295 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 ZNF727A8MUV8 499 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 PRAMEF26H0Y7S4 382 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 PPP1R2P9O14990 202 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 DEDDO75618 318 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 WISP1O95388 367 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 RNF224P0DH78 156 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 HTR5AP47898 357 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 BIDP55957 195 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 FXYD4P59646 89 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 FOXK1P85037 733 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 RSU1Q15404 277 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 UBAC2Q8NBM4 344 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 PPP4R1LQ9P1A2 415 aa12.67□□□□□ -0.38
TRIM41-204ENST00000508930 H3BML4 177 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 ASCL1P50553 236 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 IGLV3-21P80748 117 aaPredicted RBP12.66□□□□□ -0.38
TRIM41-204ENST00000508930 PYY3Q5JQD4 70 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 CARD17Q5XLA6 110 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 GKN2Q86XP6 184 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 ZNF610Q8N9Z0 462 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 MR1Q95460 341 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 FAM206AQ9NX38 181 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 DOK5Q9P104 306 aa12.66□□□□□ -0.38
TRIM41-204ENST00000508930 KIR2DS5A0A0G2JLQ3 304 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 379.5 ms