RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TDHQ8IZJ6 230 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HSD17B11Q8NBQ5 300 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR10A7Q8NGE5 316 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR10V1Q8NGI7 309 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR51F2Q8NH61 342 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SRMSQ9H3Y6 488 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF334Q9HCZ1 680 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NOX4Q9NPH5 578 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NIT2Q9NQR4 276 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 POLR1DQ9Y2S0 133 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PRELID3BQ9Y3B1 194 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 COX11Q9Y6N1 276 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TEX51A0A1B0GUA7 166 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 A0A1B0GV50 99 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 S1PR2O95136 353 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ZSCAN5DPP0CG00 497 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF25P17030 456 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SPRP35270 261 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 RAB5CP51148 216 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CLDN6P56747 220 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HOXA4Q00056 320 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ACVR1Q04771 509 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 LTBQ06643 244 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ATP6AP1Q15904 470 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NRN1LQ496H8 165 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM135Q86UB9 458 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SLC38A9Q8NBW4 561 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 P2RX4Q99571 388 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CDCA3Q99618 268 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MCRIP2Q9BUT9 160 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MROQ9BYG7 248 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 C7orf69Q9H7B7 122 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 FGF20Q9NP95 211 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PRODH2Q9UF12 536 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 BTNL2Q9UIR0 455 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PLXNB3Q9ULL4 1909 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 K7EN84 100 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 UBE2L6O14933 153 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CRXO43186 299 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HPP00738 406 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 WNT1P04628 370 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 F13BP05160 661 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 FGF1P05230 155 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CT45A8P0DMV1 189 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CT45A9P0DMV2 189 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CD36P16671 472 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PGCP20142 388 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CDX1P47902 265 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CKS1BP61024 79 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HPCAP84074 193 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 GNA12Q03113 381 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CT45A2Q5DJT8 189 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 GLT6D1Q7Z4J2 308 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR9A4Q8NGU2 314 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 Q8WTZ3 238 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TMED6Q8WW62 240 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 RDH5Q92781 318 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NAT6Q93015 286 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ACY3Q96HD9 319 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TRIB3Q96RU7 358 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NEURL2Q9BR09 285 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MBNL3Q9NUK0 354 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SPANXCQ9NY87 97 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HDGFL3Q9Y3E1 203 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TRBV7-9A0A0J9YWB2 115 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 B4GALT3O60512 393 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RP2O75695 350 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR7A10O76100 309 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 IL18BPO95998 194 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PLAUP00749 431 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 TCRBP04435 133 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ATP1B1P05026 303 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ALPLP05186 524 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 CD5P06127 495 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 SMIM17P0DL12 118 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 LRRC26Q2I0M4 334 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ATP5L2Q7Z4Y8 100 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 LILRA3Q8N6C8 439 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 NRGNQ92686 78 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 MRPL38Q96DV4 380 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF714Q96N38 554 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ACKR4Q9NPB9 350 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 A4GALTQ9NPC4 353 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 TREX1Q9NSU2 369 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM30AQ9NV96 361 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 APOBEC3BQ9UH17 382 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 NDRG2Q9UN36 371 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 INSL5Q9Y5Q6 135 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 LOC285095A0A1B0GVY8 99 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 PRSS29PA6NIE9 313 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 FAM72CH0Y354 149 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF207O43670 478 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RENP00797 406 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR8U8P0C7N1 319 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 AGTR1P30556 359 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 RPS19P39019 145 aaKnown RBP3.44□□□□□ -1.86
NEDD4-209ENST00000508871 NUDT2P50583 147 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 CLDN12P56749 244 aa3.44□□□□□ -1.86
NEDD4-209ENST00000508871 OR12D2P58182 307 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms